Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq1480 86.0 4e-12 >seq1480 Length=20701 Score = 86.0 bits (94), Expect = 4e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 12780 AATGGTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATC 12839 ||| ||||| ||| ||||| ||| || ||||| ||||| | ||||| || || || || Sbjct 6726 AATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAATACCCTC 6667 Query 12840 TTTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGT 12899 |||||||||||| | ||||||| || | |||||| ||| ||||||||| || Sbjct 6666 GCGAGTGAAAGGCATATCTTCTTGGCGGTAGGTGATACCAATGGTTCCTTTTTGTCCGTG 6607 Query 12900 AAAAGAAGCAAATTTATCTCCTATTTCAGG 12929 |||||| || || || || |||| ||| Sbjct 6606 GCGAGAAGCGAACTTGTCACCAATTTGAGG 6577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328351437502306