Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 129 5e-25
seq1537 116 3e-21
seq1847 84.2 2e-11
>seq1071
Length=16463
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || ||||||||||| ||||||| |||||| ||||||
Sbjct 1540 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCATCCTCC 1599
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| ||| || || ||| | || | |||||||| || ||||| |||||||||||||| |
Sbjct 1600 AACTGCTTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 1659
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||| | ||| ||||| | || | || |||
Sbjct 1660 ATCTTCGACTTCACATTGTCGATAGTGTCAGACGACTCAACCTCCAAAGTGATGGTCTTG 1719
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || |||||||||||
Sbjct 1720 CCAGTCAGGGTCTTGACGAAAATCTGCAT 1748
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||| || || |||||||| ||||||| || | | ||||||
Sbjct 855 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 914
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| |||| || |||||||| || || || || |||||||| ||
Sbjct 915 GAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 974
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| ||| ||||| | || | |||||| | ||| ||||||| || | || ||
Sbjct 975 AATCTTTGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCTT 1034
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || ||||||||||||||
Sbjct 1035 TCCAGTCAAGGTCTTGACAAAAATCTGCAT 1064
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | |||||||| || ||||||||||||||| || ||||| ||||||
Sbjct 1312 ACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCCTCC 1371
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| |||| || |||||||| || || || || |||||||| ||
Sbjct 1372 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGG 1431
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | ||| || | || | || ||||| | || | ||| ||
Sbjct 1432 ATCTTCGACTTCACGTTGTCAATGGTATCGGATGAT-TCCACCTCAAGCGTGATCGTCTT 1490
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || |||||||||||
Sbjct 1491 CCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520
Score = 105 bits (116), Expect = 6e-18
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| || | ||| ||||| || || ||||||||||| || ||| || ||||||||
Sbjct 1085 CAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCATCCTCGA 1144
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || || ||| | || || |||||||| || || || ||||||||||| ||| ||
Sbjct 1145 GCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAA 1204
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| ||| |||| |||||| || | || | || || |
Sbjct 1205 TCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTC 1264
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| ||||| || || || || |||||
Sbjct 1265 CGGTGAGAGTCTTGACGAAGATTTGCAT 1292
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| | ||||| |||||
Sbjct 1768 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 1827
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || ||||| ||| |||| ||||| ||||| || || || || ||||||||||||
Sbjct 1828 AGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGG 1887
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| || || | | ||||||||| | ||| | || |||
Sbjct 1888 ATCTTGCTCTTAACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 1947
Query 118710 CCGGT 118714
|| ||
Sbjct 1948 CCAGT 1952
>seq1537
Length=49637
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
|||||| || | |||||| |||||||| | || ||||| || || |||||||| ||
Sbjct 26388 ACCTCCACGAAGTCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 26447
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||||| |||||||||||| || || ||| |||| || |||||||| || || ||
Sbjct 26448 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 26507
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| || || || || | |||| ||||| | ||| ||
Sbjct 26508 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCAC 26567
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| | ||| | || ||||| ||||| || || || || || |||||| ||
Sbjct 26568 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 26619
>seq1847
Length=30800
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| | |||||| |||||| ||||| || ||||| ||||
Sbjct 17775 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 17716
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| |||||||| || ||||| || ||||||||||| || || || || | |||
Sbjct 17715 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 17656
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| || || | | ||||||||| | ||| | || ||||| |||| || || || ||
Sbjct 17655 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 17597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433812745678588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |