Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1479 289 3e-73 seq2510 205 8e-48 seq1071 138 1e-27 seq1537 104 2e-17 >seq1479 Length=10203 Score = 289 bits (320), Expect = 3e-73 Identities = 629/935 (67%), Gaps = 11/935 (1%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| || || ||||| ||||| ||| | | |||||| ||||| || || || || | Sbjct 7341 CAAG-TTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCACAGGT 7283 Query 23091 T---GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCT 23147 | ||| | || || || | || |||||||||| || || ||||| | ||||| Sbjct 7282 TAGAGCTGCGG---ATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCT 7226 Query 23148 TGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAG 23207 |||| | |||| | || | || ||||| ||| ||||||| || | ||| | Sbjct 7225 TGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCT 7166 Query 23208 TCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTC--CTCGTACTTTTGGTACAACGC 23265 |||| || | | ||| || ||| | |||| | |||||| || | ||| | || Sbjct 7165 TCTGGGCCTTGATG-GTCTTGCGACCCTTC-TTCTCCGACTCGTATTTCTCGTAGAGAGC 7108 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || || || |||||||| ||| |||| || || ||| | || ||||||||| | Sbjct 7107 CTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGT 7048 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || || ||||| || |||| || |||||||| ||||| ||||||||||| Sbjct 7047 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 6988 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || ||||| || || ||||| |||||| |||||| |||| ||||| || || || Sbjct 6987 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAA 6928 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || || ||||| ||||| | || | ||| || || || || | ||| ||||| || Sbjct 6927 GACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACC 6868 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| || ||||| | ||| ||||||||| | || | ||||| || |||| |||||| || Sbjct 6867 CTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGA 6808 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 ||| || || | | ||| | || || | || | || || || Sbjct 6807 GTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCC 6748 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || |||||| | | || || ||||| || ||| || || ||||| ||||| ||||| Sbjct 6747 GATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTC 6688 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 || || ||||| || | |||||||||| || || |||| || || | || ||| | Sbjct 6687 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACC 6628 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 || ||| ||||| ||| |||||| || |||||| ||||| || ||||| || Sbjct 6627 AGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGT 6568 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || ||||| ||||| ||||| ||||| || || | || || ||||| ||||||| Sbjct 6567 CTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATCATGTG 6508 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 || || || || | | ||| | || || || |||||||| | | || || Sbjct 6507 CTGTGGCCTTTCAGCAACGTTGCCATCAAGGCGGAGAAGGTATGAACGCTCAAGGGTCTT 6448 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 || ||||| || | ||||| || ||||| |||| Sbjct 6447 GAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGT 6413 Score = 127 bits (140), Expect = 2e-24 Identities = 357/541 (66%), Gaps = 9/541 (2%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || || || |||||||| ||||| || || | |||||| | ||| || || | Sbjct 8230 TGGTACGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGG 8171 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | || | ||||| | |||| ||||| |||||||| Sbjct 8170 AGGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGA 8111 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATG-TACGCATCGACATTTCCCATACG 22321 | || || || || || |||||||| | | ||||| | ||| || || ||||| || Sbjct 8110 TGAAGGCACCACGGTCAGCGGCCATCTGGA-CAATGGTGCGCTGGGAGATCTCCCAGACC 8052 Query 22322 GTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTA 22381 |||||||| || | |||| || ||| || ||| |||||| ||| || Sbjct 8051 GTCTTGTAGAGAGCCTTGATATCGGCCGGGATGTTGGGGATGTTCTGGATGGATCCTCCG 7992 Query 22382 TTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTG 22441 | ||||| || || || | || ||||| || ||| || ||| |||||| Sbjct 7991 TCCGCAATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTTG 7932 Query 22442 ACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTG 22501 | || | |||| || ||||| ||||| || | || ||| ||||| ||| ||||| Sbjct 7931 AGCAACCAAGGGTTGACAACTTGGAACTCACCAGCCAGGACACGGCGCGAGTAGATGTTC 7872 Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561 || ||| | || ||||| | || ||| || || ||||| | ||||||||| || ||| Sbjct 7871 GAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCAGTGGGC 7812 Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCA 22619 || ||||| | || || ||||| | | ||||||| |||| | || |||||| Sbjct 7811 ATGGGCGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGG-AC-CTTGAGGG 7754 Query 22620 TCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGC 22679 |||||||||||| |||| || || || | ||||||| ||||| || | | ||| Sbjct 7753 AGTCCCAGTCCCACAGGTCGGTAGGAGTGAC---GCCCCACATGTCGTACTGGAGCTCGC 7697 Query 22680 C 22680 | Sbjct 7696 C 7696 >seq2510 Length=23295 Score = 205 bits (226), Expect = 8e-48 Identities = 497/744 (67%), Gaps = 23/744 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| ||||| || || ||||| | || || | ||||| Sbjct 9129 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 9188 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||| || |||| | | || || Sbjct 9189 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCTCC 9248 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| || || || ||||| |||||||| | |||| | Sbjct 9249 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 9308 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 || || || | || ||| | | ||||| | ||||| ||||| || ||| | | Sbjct 9309 TT--CAGCAGCGAGGTTCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGA 9366 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || | || | || || || |||||||| || ||| | ||||| | | Sbjct 9367 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 9426 Query 57865 ACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | || || || || ||||| || ||||| || || || ||| |||||||| Sbjct 9427 CCCAGCGCACATAC-CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCC 9485 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| | ||| ||||| || | || || |||| || ||| || | || | Sbjct 9486 GACTGGGCTGTCAGGTGGATCCAA---GACAAGGATTCCACCTTTGCCCAGCGCCTGGTT 9542 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||| ||||| || ||||| ||||| || ||| || || | || || ||| | Sbjct 9543 GCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTC 9602 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || || || ||| | ||||| || || ||||||| | || || ||||| ||| Sbjct 9603 AAGAAGCGTGGTCTCATGGCTGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGATGAG 9662 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157 |||||||| ||||| || || ||||| | | ||| ||| || | | |||| | | Sbjct 9663 GGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCGCACCTT----AGACACCGCCCAAG 9718 Query 58158 CGGGATCGC-ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | | || || ||| | ||||||||||| ||||||||||| | ||||| | || Sbjct 9719 CAAGCAGGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGAC 9778 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 || || || || || ||||||| |||||| | |||||| | |||||||| Sbjct 9779 AGAGGCACTCCCATGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 9838 Query 58277 GTTTGTTGCCGACAGACTTTTGCT 58300 ||| || |||||||| || |||| Sbjct 9839 GTTCGTCGCCGACAGGCTGCTGCT 9862 >seq1071 Length=16463 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| ||||| ||||| || ||||| | || ||||| |||| Sbjct 1748 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCT 1689 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || || || ||||||||| ||| | || || |||||| Sbjct 1688 GACACTATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 1629 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| ||||| |||||||| || | ||| ||||||| || ||| Sbjct 1628 CAGCGCTTGATTTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTACAAC 1569 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || |||||||| || |||| ||| | || | || |||| Sbjct 1568 ATTCAGAAGGAGTCGACTCTCCACTTGGTCCTTCGTCTTCGTGGTGGTA 1520 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || |||||||| | || || ||| | ||| Sbjct 1520 ATGCAGATTTTCGTCAAGACTCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1461 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || || || ||| ||||| || | || || |||||| Sbjct 1460 GATACCATTGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAG 1401 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| |||| || || || |||||| ||| Sbjct 1400 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAAC 1341 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||| || |||| || | ||| | || |||| Sbjct 1340 ATTCAGAAGGAGTCTACTCTGCACTTGGTTCTGCGTCTGCGTGGTGGTA 1292 >seq1537 Length=49637 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || |||| Sbjct 26616 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 26557 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 26556 CGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 26497 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || || || | || || || Sbjct 26496 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAA 26437 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 ||| || || || || |||||||| |||| | ||||| | || ||| ||||||| Sbjct 26436 CATCCAGAAGGAGTCCACTCTTCACTTGGTCTTGAGACTTCGTGGAGGTGCCAAGAAGCG 26377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445747794824880