Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 118 2e-21
seq2510 109 1e-18
>seq1479
Length=10203
Score = 118 bits (130), Expect = 2e-21
Identities = 177/249 (71%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| ||||| |||||||| ||||| || || ||| || || ||||| ||||||
Sbjct 6749 CCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCC 6690
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904
||||| ||||| || | | | | | | |||||| || || || |||| |||| |||
Sbjct 6689 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTG-GTGT 6631
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| ||||| || || || || || | |||||||| | ||
Sbjct 6630 ACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 6571
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| |||||| | | || || ||||||||||| || |||||||||||||||||
Sbjct 6570 TGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATCAT 6511
Query 95025 GTCCTGAGG 95033
|| ||| ||
Sbjct 6510 GTGCTGTGG 6502
>seq2510
Length=23295
Score = 109 bits (120), Expect = 1e-18
Identities = 334/510 (65%), Gaps = 10/510 (2%)
Strand=Plus/Plus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCA---ATAACGATTTGGC 101907
|||||||||||||| | |||||| | | ||||| ||| || || | || ||
Sbjct 9470 CATCAAGAAGAAGGCCGACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCCACCTTTGC 9529
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
| | | |||||||| ||||| ||||| || |||||||| || | ||||| ||
Sbjct 9530 CCAGCGCCTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTC 9589
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
||||||||| ||||||| | ||| | || |||| ||||| | |||||| ||| ||||
Sbjct 9590 TATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTCACTTTCTCCAACGAGCTCAT 9649
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
|| | || || ||||| || ||||| || ||| | || || | || |
Sbjct 9650 CTCCCGCGATGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCGCA--CCTTAGA 9707
Query 102088 TGATACCCCATCAAG-AGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAAC 102146
||| | |||| || | | | || | |||| || || ||| || || |
Sbjct 9708 CACCGCCCAAGCAAGCAGGCTG--TCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGC 9765
Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206
|||| || | |||| | || || | | | || |||||| ||| |||||||
Sbjct 9766 AAGAGTTCTTGACAGAGGCACTCCCATGTGCGCTGCTCGGCATGAACGCCAACTTGATGA 9825
Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266
|| |||||||| || || || || | || || || | || || ||| ||
Sbjct 9826 AGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTTTCTCTCGGTAACGAGAAGTTCT 9885
Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG-AGAATAAGACCAAC 102325
| || ||||||||||||| |||||||| || || ||||| | || | |||||||||
Sbjct 9886 ACAAGTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCAGGA-AAGACCAAC 9944
Query 102326 TTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
|| ||||| ||| | |||||||| || |||
Sbjct 9945 TTCTTTGAGAAGCGTGTCGCCGACTACCAA 9974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989541664668745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |