Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 183 4e-41
seq2510 125 9e-24
>seq1479
Length=10203
Score = 183 bits (202), Expect = 4e-41
Identities = 568/869 (65%), Gaps = 14/869 (2%)
Strand=Plus/Minus
Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002
|||| ||||||| ||||||||||| ||||||| | | | | || | | |||||
Sbjct 7352 GCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCC 7293
Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062
||||| || ||| | ||| || || | || | || || ||||| ||| ||
Sbjct 7292 GTGCACAGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 7233
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
|||||||| || | ||||| || | || || ||| ||||||| || | ||| | | |
Sbjct 7232 GCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTAC 7173
Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT-TTCTCTT--TCGTATAGA-- 63176
|| | | || | ||||| || | ||| | | | ||||| ||||||
Sbjct 7172 CAAA-GCTTCTGGGCCTTGATGGTC---TTGCGACCCTTCTTCTCCGACTCGTATTTCTC 7117
Query 63177 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGA 63236
||| | | | |||||||| || || |||| | |||||| ||| ||||| | ||
Sbjct 7116 GTAGAGAGCC--TCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGG 7059
Query 63237 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63296
||||| | | ||| || |||| | || || || ||||| |||||||| || |||||
Sbjct 7058 CACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAG 6999
Query 63297 AGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63355
||||| || || || || | | | |||||| || || ||||| | | ||
Sbjct 6998 AGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTC 6940
Query 63356 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415
| |||| | | | ||||| ||||| || || | || ||||| | | ||||| ||
Sbjct 6939 CAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCG 6880
Query 63416 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63475
||||| || ||||| || | |||||| || ||||| || | || | | ||| ||||
Sbjct 6879 CTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAAC 6820
Query 63476 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACT 63535
|||||||| || | || |||||||||| || || | || ||||||| ||| |
Sbjct 6819 GATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATG 6760
Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595
|| | || || || || || | || ||||| | || ||| || | |||||
Sbjct 6759 GATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTC 6700
Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
|||||| || || || ||||| || |||||| | | || ||| |||| |||
Sbjct 6699 ATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGC 6640
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
| | || || ||||| || | || || || ||||| || || |||| ||| |
Sbjct 6639 CTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACAT 6580
Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 63775
|| ||||| |||||||| || || |||||| ||||| || || || |||||
Sbjct 6579 GAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACG 6520
Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAA 63804
||| | ||||||||| || |||||| |||
Sbjct 6519 CATAATCATGTGCTGTGGCCTTTCAGCAA 6491
>seq2510
Length=23295
Score = 125 bits (138), Expect = 9e-24
Identities = 177/248 (71%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| || ||| |||||||| || | || | ||||| || || |||||
Sbjct 9685 CAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGG 9626
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| | ||| || |||||||| || ||||| || || || ||||| || ||||| ||||||
Sbjct 9625 CCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAG 9566
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33758
|| || || || ||||| ||||||| || | || || | || | |||| ||
Sbjct 9565 ATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTTGTCTTGG 9506
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
|||||| | |||||| ||||||||||| || | ||||| || || || ||||||||
Sbjct 9505 ATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTG 9446
Query 33819 AAGAGATA 33826
||||| ||
Sbjct 9445 AAGAGGTA 9438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629791312987920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |