Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2510 125 1e-23
>seq2510
Length=23295
Score = 125 bits (138), Expect = 1e-23
Identities = 177/248 (71%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| || ||| ||||||||||| | || | |||||||| || |||||
Sbjct 9685 CAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGG 9626
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| | ||| || |||||||| || ||||| || ||||| || || || || || ||||||
Sbjct 9625 CCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAG 9566
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241
|| || || || || || ||||||| || | || || | || | |||| ||
Sbjct 9565 ATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTTGTCTTGG 9506
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||| | |||||| ||||||||||| || | ||||| || || || ||||||||
Sbjct 9505 ATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTG 9446
Query 42302 AAGAGATA 42309
||||| ||
Sbjct 9445 AAGAGGTA 9438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671111188327640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |