Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2510 170 3e-37
seq1479 109 8e-19
>seq2510
Length=23295
Score = 170 bits (188), Expect = 3e-37
Identities = 386/578 (67%), Gaps = 7/578 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| | || || || ||||| | || ||| | || ||
Sbjct 9129 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 9188
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | ||| | | ||| |||||| | || || ||
Sbjct 9189 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCTCC 9248
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| |||| || || ||||| |||||||| || || | ||
Sbjct 9249 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 9308
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| | || ||||||| ||||| ||||| ||||||||||||||
Sbjct 9309 TTCAGCAGCGAGGTTCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 9368
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||| | || | ||||| || || |||| ||||| || | |
Sbjct 9369 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCC 9428
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
|| || | | || ||||| || || ||||| || | || | || || |||||
Sbjct 9429 CAGCGCACATAC---CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCC 9485
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| | |||||||| | ||| | | || | | ||| | | ||||| ||
Sbjct 9486 GACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGCC 9545
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| ||||| ||||| |||||||| || || || || | || || |||||||||
Sbjct 9546 TTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAG 9605
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||| | || || || | |||||| | || || || || |||||
Sbjct 9606 AAGCGTGGTCTCATGGCTGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGT 9665
Query 125556 CTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT 125592
|| ||| |||||| ||| || || || ||||| ||
Sbjct 9666 CTCCACACTGACTTCGCCTGCCTCCTCTTCTCGCACCT 9703
>seq1479
Length=10203
Score = 109 bits (120), Expect = 8e-19
Identities = 313/475 (66%), Gaps = 10/475 (2%)
Strand=Plus/Plus
Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
|||||||| ||||| ||||| || || || || || | ||| |||| | || || |
Sbjct 6854 GATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTATGTTGAGCCAT 6913
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
||||||| || || || || || | || || | || ||| ||| || || | |
Sbjct 6914 GGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCC 6973
Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CA 97041
| ||| | |||||||| || || |||||| | || ||| | ||||||||||| || |
Sbjct 6974 GTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGA 7033
Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101
| |||||| |||||| || ||||||||| || | || || || | || |
Sbjct 7034 AGAACGGTG---ACTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTGGCGGACGTTT 7090
Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAG-GGCCGATACGTGAGA 97160
|| || ||||| ||||| ||| | |||||| ||| | | || |||
Sbjct 7091 ACGGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCGCAAGA 7150
Query 97161 CGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219
| | || | || | |||| || ||| | |||| | | ||||| ||||| ||||
Sbjct 7151 CCA-TCAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAA 7208
Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279
|| | ||| | ||||||||| | || ||||| |||||||| || | || ||
Sbjct 7209 CCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTAC 7268
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
|||| |||| || ||||||||||| ||||| |||||| | |||| || |||
Sbjct 7269 CATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAG 7323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741028270041640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |