Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 104 5e-17
>seq1071
Length=16463
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||||||||| || || ||||| || || || ||||| | ||| | || ||
Sbjct 1081 AGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCATCC 1140
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || || || ||||| || | ||| || || || || || || || |||||
Sbjct 1141 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 1200
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| | || || || || | |||||| | || || || || ||||| |||
Sbjct 1201 TGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 1260
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || || || || || |||||
Sbjct 1261 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1292
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| || || || || || || || || || || || ||
Sbjct 874 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCGAAG 933
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||| || || || || || || || |||||||||||||||| || || ||
Sbjct 934 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTTGACTTAACGTTG 993
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||| || || || ||||| || ||||| ||||| ||||| | || || |||
Sbjct 994 TCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACA 1053
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 1054 AAAATCTGCAT 1064
Score = 86.0 bits (94), Expect = 1e-11
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || ||||| ||||| | ||| || || | || || ||
Sbjct 1552 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAACTGCTTGCCC 1611
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| | | ||| || || ||||| || || || || ||||||||||| | ||
Sbjct 1612 GCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTC 1671
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || || | || ||||| | || || ||||| ||||| || ||
Sbjct 1672 ACATTGTCGATAGTGTCAGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTC 1731
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1732 TTGACGAAAATCTGCAT 1748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151349142097012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |