Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 89.7 4e-13
>seq1071
Length=16463
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCT 48575
||| || ||||| ||||||||||| || |||||||| || || | ||| | | ||||
Sbjct 855 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTCCTCCCATCCT 913
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| |||||||| ||| || | || | |||||||| ||| || | || ||||| |||
Sbjct 914 CGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCT 973
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||| || ||| | | ||||| || | |||||| ||||| || ||||| |
Sbjct 974 GAATCTTTGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCT 1033
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || || | || || ||||||||||||||
Sbjct 1034 TTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1064
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| |||||||||||||| | ||| || | ||||||||||||||||| | |
Sbjct 1329 CTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAA 1388
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | |||||||| ||| || | || ||||| ||| || ||| ||| |
Sbjct 1389 GATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGGATCTTCGACTTCACGTT 1448
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| |||||||||| || ||| ||| | || || || || || || ||||| || ||
Sbjct 1449 GTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCGTCTTCCCCGTAAGAGTCTTGAC 1508
Query 48715 AAAAATCTGCAT 48726
|||||||||||
Sbjct 1509 GAAAATCTGCAT 1520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421234057577339
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |