Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1480 87.8 2e-12 >seq1480 Length=20701 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 19350 CTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTG 19409 |||| | ||| |||| ||||| ||||| |||||| | |||||||| || || Sbjct 6569 CTAAGGTTCCTCAAATTGGTGACAAGTTCGCTTCTCGCCACGGACAAAAAGGAACCATTG 6628 Query 19410 GTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTA 19469 |||| | || || ||||||||||||||||| ||| || ||||| ||||| || || | Sbjct 6629 GTATCACCTACCGCCAAGAAGATATGCCTTTCACTCGCGAGGGTATTGTGCCTGACCTCA 6688 Query 19470 TTATTAACCCACATGCTTTTCCAAGTCGAATGACGCTT 19507 | || ||||| || || |||| ||| |||||| || Sbjct 6689 TCATCAACCCCCACGCCATTCCTTCTCGTATGACGATT 6726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595847129792400