Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq286 116 6e-22
seq1817 100 4e-17
>seq286
Length=32783
Score = 116 bits (128), Expect = 6e-22
Identities = 124/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| |||| | |||| ||||||| || || |||| |||||
Sbjct 25879 TGATCTACGAGGAGACCCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATG 25938
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||||||| | ||| ||||||| |
Sbjct 25939 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGATGTCGTCTACG 25998
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| |||| ||||||||||| | | || ||||| || |||||
Sbjct 25999 CCCTGAAGCGTCAAGGCCGCACCCTGTACGGTTTCGGCGGTTAA 26042
>seq1817
Length=32804
Score = 100 bits (110), Expect = 4e-17
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| |||||
Sbjct 26104 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCTGCTAT 26046
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
| | ||||| || ||||||||||| ||||||||| ||||
Sbjct 26045 CAGACGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTC 26007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072147128927
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |