Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 187 3e-42
seq2510 131 2e-25
>seq1479
Length=10203
Score = 187 bits (206), Expect = 3e-42
Identities = 567/866 (65%), Gaps = 14/866 (2%)
Strand=Plus/Minus
Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950
||||| ||||||| ||||| ||||| ||||||| | | | | || | | |||||
Sbjct 7353 GGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTC 7294
Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010
||||| || ||| | ||| || || | || | || || ||||| ||| ||
Sbjct 7293 CGTGCACAGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 7234
Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070
|||||||| || | ||||| || | || || ||| ||||||| || | ||| | |
Sbjct 7233 AGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTA 7174
Query 63071 CCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT-TTCTCTT--TCGTATAGT- 63125
||| | | || | ||||| || | ||| | | | ||||| ||||||
Sbjct 7173 CCAAA-GCTTCTGGGCCTTGATGGTC---TTGCGACCCTTCTTCTCCGACTCGTATTTCT 7118
Query 63126 -GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184
||| | | | |||||||| || || |||| | |||||||||| ||||| | ||
Sbjct 7117 CGTAGAGAGCC--TCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGG 7060
Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63244
||||| | | ||| || |||| | || || || ||||| |||||||| || |||||
Sbjct 7059 GCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCA 7000
Query 63245 AAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT 63303
||||| || || || || | || | |||||| || || ||||| | | |
Sbjct 6999 GAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGT 6941
Query 63304 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCC 63363
| | |||| | | | ||||| ||||| || || | || ||||| | | ||||| |
Sbjct 6940 CCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGC 6881
Query 63364 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 63423
| ||||| || ||||| || | |||||| || ||||| || | || | | ||| ||||
Sbjct 6880 GCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAA 6821
Query 63424 TAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTAC 63483
|||||||| || | || |||||||||| || || || ||||||| ||| |
Sbjct 6820 CGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGAT 6761
Query 63484 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63543
|| | || || || || || | || ||||| | || ||| || | ||||
Sbjct 6760 GGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGT 6701
Query 63544 CATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63603
||||||||||||| || ||||| || |||||| | | || ||| |||| |||
Sbjct 6700 CATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGG 6641
Query 63604 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 63663
| || || ||||| || | || || || ||||| || || |||| ||| |
Sbjct 6640 CCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACA 6581
Query 63664 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723
|| ||||| |||||||| || || |||||| ||||| || || || ||||
Sbjct 6580 TGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACAC 6521
Query 63724 GCATTAACATGTGCTGAGGTCTTTCA 63749
|||| | ||||||||| || ||||||
Sbjct 6520 GCATAATCATGTGCTGTGGCCTTTCA 6495
>seq2510
Length=23295
Score = 131 bits (144), Expect = 2e-25
Identities = 178/248 (72%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| || ||| |||||||| || | || || |||||||| || |||||
Sbjct 9685 CAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGG 9626
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| | ||| || |||||||| || ||||| || || || ||||| || || || ||||||
Sbjct 9625 CCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAG 9566
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33480
|| || || || ||||| ||||||| || | || || | || | |||| ||
Sbjct 9565 ATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTTGTCTTGG 9506
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
|||||| | |||||| ||||||||||| || | ||||| || || || ||||||||
Sbjct 9505 ATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTG 9446
Query 33541 AAGAGATA 33548
||||| ||
Sbjct 9445 AAGAGGTA 9438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622921199741240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |