Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 129 5e-25
seq1537 102 7e-17
>seq1071
Length=16463
Score = 129 bits (142), Expect = 5e-25
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||| || || ||||||| | || || |||||||||
Sbjct 1748 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCT 1689
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| | || | ||| ||||| || || ||||| || |||||
Sbjct 1688 GACACTATCGACAATGTGAAGTCGAAGATTCA-GGACAAGGAGGGCATTCCTCCGGACCA 1630
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | ||||| || ||||| || || || |||| ||||||| || |||| |||||
Sbjct 1629 GCAGCGCTTGATTTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTACAA 1570
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || || || || || || || ||
Sbjct 1569 CATTCAGAAGGAGTCGACTCTCCACTTGGTCCT 1537
>seq1537
Length=49637
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| |||| || || | ||||| | || |||||||||||
Sbjct 26615 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 26556
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||||||||| || || ||| || ||| ||||| || || ||||| || ||||
Sbjct 26555 GACACTATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACC 26498
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | || || |||||||| || | || |||| ||||| | || ||||
Sbjct 26497 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACA 26438
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || || || || ||||| || || || || | || || | |||||
Sbjct 26437 ACATCCAGAAGGAGTCCACTCTTCACTTGGTCTTGAGACTTCGTGGAGG 26389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433310366123285
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |