Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1071 167 4e-36 seq1847 116 7e-21 seq2510 104 4e-17 seq340 102 2e-16 seq62 87.8 3e-12 >seq1071 Length=16463 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || ||| ||| || |||||||| || ||| Sbjct 838 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 897 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||||||||| || | ||||||||||||||| || || | || ||||| ||||| Sbjct 898 AGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGG 957 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||||| ||| ||| || |||||||||| || || || Sbjct 958 ATACCCTCCTTATCCTGAATCTTTGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACC 1017 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| || | ||||||||| || |||||||| Sbjct 1018 TCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1064 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | |||| |||||||| || |||||||| ||||| || Sbjct 1066 CCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGAC 1125 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| || ||||| || || | || ||||| ||||| Sbjct 1126 AAAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1185 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||||||||| | ||||||| |||||||| || | || || ||| Sbjct 1186 ATGCCCTCCTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 1245 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || ||||| ||||| ||||||||||| || ||||| Sbjct 1246 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1292 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||||| || || ||||| || ||| Sbjct 1522 CCACCACGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTC 1581 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || ||||| || | | || ||||| || ||| Sbjct 1582 AGAGTGCGACCATCCTCCAACTGCTTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGAGGA 1641 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||| || ||||| ||||| | || || || Sbjct 1642 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATAGTGTCAGACGACTCAACC 1701 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || || |||||||||||||| |||||||| Sbjct 1702 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1748 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || ||||| || || ||||| |||||||| Sbjct 1294 CCACCACGCAGACGCAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGAC 1353 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| || || || || || | || ||||| ||||| Sbjct 1354 AAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 1413 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| | ||| ||| || ||||| || | |||||| || Sbjct 1414 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATGATTCCACC 1473 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || ||||| || ||||||||||| |||||||| Sbjct 1474 TCAAGCGTGATCGTCTTCCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520 Score = 127 bits (140), Expect = 4e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || |||||||| || |||||||| || |||||| Sbjct 1750 CCACCACGCAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1809 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||| ||||| || ||| Sbjct 1810 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 1869 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||| || ||||| || || | || || || Sbjct 1870 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACATTGTCGATAGTATCGGAGGACTCGACC 1929 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 1930 TCAAGGGTGATGGTCTTGCCAGTGA 1954 >seq1847 Length=30800 Score = 116 bits (128), Expect = 7e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| || || || || Sbjct 17775 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 17716 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || ||||| || |||||||| || ||||| | |||||| ||| Sbjct 17715 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 17656 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | || || || || | ||||||||| || ||||| | |||||||||||| Sbjct 17655 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 17597 >seq2510 Length=23295 Score = 104 bits (114), Expect = 4e-17 Identities = 559/883 (63%), Gaps = 59/883 (7%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||| || | || || ||| |||||||||| ||| || | Sbjct 9989 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 9930 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTC-TCGGC--GCCAAACTGCTTGGGGTA 10051 ||||| ||| |||||||||||| |||||||| | | | | |||| || | | Sbjct 9929 CAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTAGACTTGTAGAACTTCTCG---TT 9873 Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111 |||||| | | | | ||| || |||||||| ||||| || |||||| || | Sbjct 9872 ACCGAGAGAAAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 9813 Query 10112 GTTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGA 10170 ||||||||| | || ||| || |||| || || | ||| || | ||| | |||| Sbjct 9812 GTTCATGCCGAGCA-GCGCACATGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGA 9754 Query 10171 CCGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTT--CTCGAGC----- 10223 | || |||| |||| || || || ||||| || | || | || Sbjct 9753 CAGC---CTCGGTGATG---------ACATCCTGG-ACAGCCTGCTTGCTTGGGCGGTGT 9707 Query 10224 ------TTCGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATG 10277 | ||| | ||||| | || | |||||| ||||| |||||| |||| Sbjct 9706 CTAAGGTGCGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATG 9647 Query 10278 AACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCG 10337 | ||||||||| ||| || || | |||||| || || || ||||||||||| | | Sbjct 9646 AGCTCGTTGGAGAAAGTGAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAG 9587 Query 10338 CAGAACGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCG 10397 |||||| |||||||| | | |||||| ||| | |||| || ||||||| || Sbjct 9586 GCGAACGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCA 9527 Query 10398 AAGGAGCGGTCGCGCGAAAAGTAT----TTCGAGGCCCACGCTGCCTTCTTTCCCACGGC 10453 |||| | || | | | || | ||||| | |||||||| | | Sbjct 9526 AAGGTGGAATC-CTTGTCTTGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCA 9468 Query 10454 AGGGATCGTCTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGC 10513 |||||| |||||||| || | |||||| | | |||| || || |||| || | Sbjct 9467 AGGGATGGTCTCGATGGCATTGAAGAGGTATGTGCGCTGGGCCTGCTCCTTGATGTATGT 9408 Query 10514 ATCAAGGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTA 10573 || | ||| ||||||||| |||| ||| | | |||| | ||| || |||| Sbjct 9407 GTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTA 9348 Query 10574 GAACATACGTGCCGAGGGGTCCGTGACTT---CCTCG--GC-AAAGTTGTTGTTCAGGTT 10627 ||| || ||| || | || || ||||| || ||| | | ||||| Sbjct 9347 GAAGCAGCGGGCC------TCTGGGATTTGAACCTCGCTGCTGAAGCGCTCGAGGAGGTT 9294 Query 10628 CTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCG 10687 ||| | || || || || | || ||||| |||| | ||| |||||||| ||| Sbjct 9293 CTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCG 9234 Query 10688 CTCATCATCGTT----CAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCT 10743 |||||| || || | ||| || |||||| | |||| | ||| | | || Sbjct 9233 CTCATCGTCATTGAGACGGTTGTT----CCAGTCGTGAAGGTCCTTGGAGAGGTCAATCT 9178 Query 10744 CCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 |||| | |||||||||| || | ||||||||||||||||| Sbjct 9177 CCTCTGCAGTCCAGAAAGACGCTTCCGCCTTCTTGTACATCTG 9135 >seq340 Length=19069 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 225432 CCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCG 225491 ||| ||| || | ||||||||||| |||||||| || || |||| || | | | | Sbjct 7811 CCGTGCAGACCTCATCAAGGAAGCCGGAGTCGTGAGAAACGATGAGAGAAGTGATCTCGG 7752 Query 225492 TCAGGCCCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTA 225550 | || ||| |||| || || ||||| |||||| || |||| |||||| ||| Sbjct 7751 TGTGGGTCTTCAGGTA-GTCCTGGAGCCACTTAACGTTGGCAACATCCAAGTGGTTAGTA 7693 Query 225551 GGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTC 225610 |||||||||| || |||| ||||| | ||||| || || | | |||| |||||| Sbjct 7692 GGTTCGTCCAAGAGGAGGACATCAGCCTTCATGAGCATAGCTCTGGCAAGAGCGAGCTTC 7633 Query 225611 ATTTTCCAGCCCCCGGACAGGGAGCCGA 225638 || ||||| || || ||||||||||||| Sbjct 7632 ATCTTCCATCCACCAGACAGGGAGCCGA 7605 Score = 95.1 bits (104), Expect = 2e-14 Identities = 131/181 (72%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033 ||| || |||||||||| |||||||||||||||| | || || || |||||| || | Sbjct 8272 GGCGTAGCGCCACTGGAGGTACTGGTTGGGGGTCTTCTCGAGATGCATCTCAACGTGCTC 8213 Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093 | || ||||| | ||| | || |||| |||||| |||||| ||| ||| Sbjct 8212 AAGGGCGTGCTGCTTAATGTATCCGATACGCAAGTTGGGGTGCTTCTCAACACGGCC--- 8156 Query 225094 AGTCGGTTG----TGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCAT 225149 ||| ||||| | |||||| || |||| |||||||||||||| ||| || ||||| | Sbjct 8155 AGT-GGTTGGGATGGTCTCGCCAGTCAGGAGCTTGATGAGCGTAGACTTTCCGGCACCGT 8097 Query 225150 T 225150 | Sbjct 8096 T 8096 >seq62 Length=60133 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 195992 TGGGTCGTCTTTGACGAAATCCACTACATGTCCGACGATGCGCGTGGTACCGTGTGGGAA 196051 ||||||||||| ||||||||||| || ||| ||| | || |||||| ||||||||| Sbjct 2450 TGGGTCGTCTTCGACGAAATCCATTATATGAGAGACAAGGCTCGTGGTGTTGTGTGGGAA 2509 Query 196052 GAAAGCCTTATCCTCATCCCGGATACCATCCGCTGTGTCTTTTTGTCCGCGACTGTTCCC 196111 || | | | ||||| |||| || | |||||| ||||| ||||||| || ||||| Sbjct 2510 GAGACCATCATCCTTCTCCCAGACAAGGTCCGCTACGTCTTCCTGTCCGCCACCATTCCC 2569 Query 196112 AAC 196114 ||| Sbjct 2570 AAC 2572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921583933785080