Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 113 4e-20
>seq1071
Length=16463
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | || ||| || || | ||||| || || |||||||||||||||
Sbjct 1291 ATACCACCACGCAGACGCAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCG 1350
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || || |||||||| |||| || ||||| ||||||||
Sbjct 1351 GACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGT 1410
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || ||||| || | | |||| ||| |||| |||||
Sbjct 1411 GGGATACCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATGATTCC 1470
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | ||| || || || ||||| || || |||||||||||
Sbjct 1471 ACCTCAAGCGTGATCGTCTTCCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || || || | || || || || ||||||||||| |||
Sbjct 1519 ATACCACCACGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCG 1578
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| ||| ||| ||| || | || || || ||| | || | ||||| |||||||||
Sbjct 1579 CTCAGAGTGCGACCATCCTCCAACTGCTTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGA 1638
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| |||||| || | | || | ||||| | || ||
Sbjct 1639 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATAGTGTCAGACGACTCA 1698
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| ||||| || || || |||||||||||
Sbjct 1699 ACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1748
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| | ||||| || || || || || |||||||||||
Sbjct 1063 ATACCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCA 1122
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| |||||| ||| || || || || || ||| | || || ||||| ||||||||
Sbjct 1123 GACAAAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 1182
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || || || |||||| || | | || | ||| || | || |||
Sbjct 1183 GGGATGCCCTCCTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCG 1242
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || ||||| ||||| || || || || |||||
Sbjct 1243 ACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1292
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || |||||||| ||||||| || | ||| || || || || || ||| ||
Sbjct 874 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCGAAG 933
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| || ||||| |||||||| || || || || || || ||||||| || | |
Sbjct 934 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTTGACTTAACGTTG 993
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|||| |||||| | || || || || | || | || || || |||| || || |||
Sbjct 994 TCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACA 1053
Query 114372 AAAATCTGCAT 114382
|||||||||||
Sbjct 1054 AAAATCTGCAT 1064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420117303024468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |