Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2510 378 1e-99 seq1479 354 2e-92 >seq2510 Length=23295 Score = 378 bits (418), Expect = 1e-99 Identities = 611/857 (71%), Gaps = 24/857 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||||||| | || |||||| || |||||||||||||| Sbjct 9129 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 9188 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415 |||||||| || |||| | || |||| | |||| || | ||| || Sbjct 9189 TCCAAGGACCTTCACGACTGGAACA-ACCGTCTCAATGACGATGAGCGCTACTTCATCTC 9247 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || || ||||||||||| |||||||| || ||||| |||||||| || | || Sbjct 9248 CCACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCT--CCTCGAG 9305 Query 42476 G--TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533 |||| | ||||| || | ||||| |||||||||||||| ||||| || Sbjct 9306 CGCTTCAGCAGCGAGGTTCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATG 9365 Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593 || |||||| | ||| | ||| ||| || || || |||| |||||| ||| | Sbjct 9366 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 9425 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 | | |||| | || ||||| ||||| ||||| || || ||||||||||||||||| Sbjct 9426 GCCCAGCGCACATACCTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCC 9485 Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 |||||||| ||| |||||| | || | | | | || || | | || | ||||| || Sbjct 9486 GACTGGGCTGTCAGGTGGATCCA-AGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGC 9544 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 ||| | ||||| ||||| ||||||||||| ||| | |||||||| || ||||||||||| Sbjct 9545 CTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAA 9604 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || ||| || ||| | || ||||| ||||| ||||| |||||| | | || |||| Sbjct 9605 GAAGCGTGGTCTC-ATGGCTGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGATGAGG 9663 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG- 42890 | || || | ||||| ||||||||||| |||||| ||||| || ||| |||| | Sbjct 9664 GTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCG---CACCTTAGACAC-CGCCCAAGC 9719 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| || |||| || ||||||| ||||| || | ||||||| | |||||| | || Sbjct 9720 AAGCAGGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACA 9779 Query 42951 CAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATG-TGCAAGTACATCC 43008 || | || ||| ||| | ||| ||||||||||| | || | ||| |||| ||||| Sbjct 9780 GAGGCACT-CCCATGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAA-TACATTG 9837 Query 43009 AGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC-AGCCGCCTCTACAACACGCCG 43067 ||| |||||||||| || ||| | ||| | || | ||||||| | | Sbjct 9838 AGTTCGTCGCCGACAGGCTGCTGCTTTCTCTCGGTAACGAGAAG-TTCTACAAGTCTACC 9896 Query 43068 TGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAG 43127 |||||||||||| |||||||||||||| ||| || ||||||||||| || |||||| Sbjct 9897 AACCCCTTCGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAG 9956 Query 43128 CGCGTCGCCGACTACCA 43144 || |||||||||||||| Sbjct 9957 CGTGTCGCCGACTACCA 9973 >seq1479 Length=10203 Score = 354 bits (392), Expect = 2e-92 Identities = 1119/1715 (65%), Gaps = 57/1715 (3%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| || || ||||||| |||| | ||||||||||||||||||||| Sbjct 8261 ACGGTGAACTGGATAGGAGCCGAGGCGGCCATGGTACGGAGGTAGTACATGCCGGTCTTG 8202 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || |||| | | |||||||| || | ||| ||| || ||||| Sbjct 8201 AGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTGATCTTGCCCAT--TG----TTGGG 8148 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 || | | | || ||||||||||||| ||| |||| ||||| | || || Sbjct 8147 TCCTTCATGTG------GATGTTGAGGGACTGGGACTGATCGATGAAGGCACCACGGTCA 8094 Query 243917 GCGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 |||||||| || | ||| | ||| || ||||| | |||||||||||| | ||| Sbjct 8093 GCGGCCATCTGGACAATGGTGCG-CTGGGAGATCTCCCAGACCGTCTTGTAGAGAGCCTT 8035 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || | | |||| ||||||||| | || || || | |||| || | Sbjct 8034 GATATCGGCCGGGATGTTGGGGATGTTCTGGATGGATCCTCCGTCCGCAATGATGCGGTT 7975 Query 244036 GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCAC 244095 |||||| || |||||| |||| | ||| | | || || ||| || Sbjct 7974 CTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTTGAGCAACCAAGGGTTGAC 7915 Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155 || || ||||| || | ||| || |||||| ||||| ||| | || ||||||| Sbjct 7914 AACTTGGAACTCACCAGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAA 7855 Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215 || ||| || ||| || ||||| | || ||||| |||||||||| || || || Sbjct 7854 GCACTCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCAGTGGGCATGGGCGCAACGAGAAG 7795 Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275 ||| | || |||||| || ||| ||| |||| || ||||||||||| | | Sbjct 7794 GGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGGGAGTCCCAGTCCCACAGGTC 7735 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335 | ||| ||| |||||||||||| |||| ||| |||||| || || Sbjct 7734 GGT-AGGAG--------TGACGCCCCACATGTCGTACTGGAGCTCGCCCTTGGACACTGG 7684 Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCTCGTCGA 244394 |||||||||||| ||| | |||| | |||||||| || | | | | ||| | Sbjct 7683 AGATCCCTCGTAGGTCTCGTACGTGCCGTGGATCTGGGCCAACTCAACGGATGCAGTCAA 7624 Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454 | | ||| |||||||||||| |||||| ||| | || |||| | | | Sbjct 7623 AG-CACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGTGCTTAGCCTCGGGGGAAT 7565 Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 |||||| | || | || ||| | || || || ||||| || |||| | | | Sbjct 7564 CGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCTGGACACCGACAGCAACTG 7505 Query 244515 GTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCA 244574 ||||||| || |||| |||| |||| || |||||||| ||||| | || || | Sbjct 7504 GTCTGTGACGGAAGTTGCTGCGCCTGGCCTCCTCGACGGGGTAGTAGTTGACATCAATAA 7445 Query 244575 CCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAAAGTCGTAC 244633 |||||| ||||| | | || | | ||| ||| ||| ||| |||||||| Sbjct 7444 TCTTGTTCAGGTT-CTTAACAACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGTCGTAT 7386 Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACGCTGGCCA 244691 | | | ||| ||| ||| | ||||| ||||| | | |||| Sbjct 7385 GTGCCG------TTGGCCATG-------TCA-ACGTACGTTGGAAGGGCAAGGGATGCCA 7340 Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751 ||| || ||||| ||||| || | | ||||| ||||||||| ||||| |||||| Sbjct 7339 AGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCACAGGTTAG 7280 Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811 || |||||| || |||| || || ||| |||| |||||| || |||||||| | Sbjct 7279 AGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACA 7220 Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871 |||||| || || ||||| ||| | |||| | | || ||| || | | | Sbjct 7219 ACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGG 7160 Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 |||||| ||| ||||| |||| ||| | |||||| ||| || |||||||||| Sbjct 7159 CCTTGATGGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAGCCTCGAACT 7100 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCCACTC 244989 | || | || || | | || ||||| || | |||||||||||| |||| || Sbjct 7099 CATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTG--GGGCACATGAGAGTCCAGTC 7042 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 ||| | || || | || ||||||||| || ||||||||||| || | ||| | ||| Sbjct 7041 ACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTC 6982 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | || | || ||| ||| ||||||||||| ||||| || || ||||| || Sbjct 6981 ACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAAGACATC 6922 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||| ||||| | |||| |||| ||| || || ||||||||||| |||||||| Sbjct 6921 AGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTC 6862 Query 245170 CACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGC 245228 || || | || | |||||||| ||| || | || || || ||||| |||| | Sbjct 6861 AACGTATCTGGC-AGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTC 6803 Query 245229 CGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGATGGACATGCCTAG 245286 ||||||| || ||||| || || || | | | | | || |||| || || | Sbjct 6802 CGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATG--GATGTTCAATCCGAT 6745 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 || ||||| ||| ||||| | ||| || |||||| ||||| || ||||| || Sbjct 6744 ACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCAAT 6685 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406 || ||| |||||||| || || |||||||| |||||||||| || | | || || | Sbjct 6684 ACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCT--GTGGTGTACCA 6627 Query 245407 G--TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | ||||| || || ||| |||||| || ||||| Sbjct 6626 GCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTA 6592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944299785642640