Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq340 84.2 5e-11 >seq340 Length=19069 Score = 84.2 bits (92), Expect = 5e-11 Identities = 198/299 (66%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 333693 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 333752 |||| |||||||||| | ||||| || ||| ||||| |||| || || |||||| Sbjct 7911 AGGGTGTAGTAACTCTTGGCCTCGGGCTTCTGCTTGACGAAATCGGCCAAGTTACCCTTG 7852 Query 333753 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 333812 || |||||| || ||||| ||| ||| ||||| || | || ||| Sbjct 7851 TAGCAGGCCAGCTTCTTTCCGGGCTCGTAGTGGTAGATATCCGTGCAGACCTCATCAAGG 7792 Query 333813 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 333872 || ||||||||||| || || || | | | | || | || | ||||||| || Sbjct 7791 AAGCCGGAGTCGTGAGAAACGATGAGAGAAGTGATCTCGGTGTGGGTCTTCAGGTAGTCC 7732 Query 333873 ATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGC 333932 |||||| | ||||| | ||| | ||||| || || ||||| | || || | Sbjct 7731 TGGAGCCACTTAACGTTGGCAACATCCAAGTGGTTAGTAGGTTCGTCCAAGAGGAGGACA 7672 Query 333933 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 | || |||| |||||| || | ||||||||||| ||||| ||||| || || || || Sbjct 7671 TCAGCCTTCATGAGCATAGCTCTGGCAAGAGCGAGCTTCATCTTCCATCCACCAGACAG 7613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102832817759650