Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1479 300 2e-76 seq2510 134 2e-26 >seq1479 Length=10203 Score = 300 bits (332), Expect = 2e-76 Identities = 1134/1761 (64%), Gaps = 65/1761 (4%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || |||||||| || |||||||| || | ||||| |||| Sbjct 8225 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTG 8166 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | |||||| | |||| || ||| | ||||| |||||||||||| Sbjct 8165 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATGAAG 8106 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 ||||| || || ||||| | | || || | | || | || ||||| || || Sbjct 8105 GCACCACGGTCAGCGGCCATCTGGA-CA-ATGGTGCG-CTGGGAGATCTCCCAGACCGTC 8049 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 ||||||| ||| ||||| | ||||| | ||| || |||||||| || || || Sbjct 8048 TTGTAGAGAGCCTTGATATCGGCCGGGATGTTGGGGATGTTCTGGATGGATCCTCCGTCC 7989 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT---------TTTGAGA 113884 | ||| | | |||||| | | ||||| || || || | |||||| Sbjct 7988 GCAATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTTGAG- 7930 Query 113885 TCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 113944 | ||| | | |||||||| |||||||| || ||| || | | ||| Sbjct 7929 -CAACCAAGGG-------TTGACAACTTGGAACTCACCAGCCAGGACACGGCGCGAGTAG 7878 Query 113945 ATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCT 114004 || || | ||||||||||| |||||||| ||| || | || |||| ||| || || Sbjct 7877 ATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCA 7818 Query 114005 GTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTG 114064 ||||||||||| || | ||||||| ||| |||| ||| | | | | || | ||||| Sbjct 7817 GTGGGCATGGGCGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTG 7758 Query 114065 AGGGCGTCCCAGTCGTA---GTTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119 |||| ||||||||| | || | || || | || |||||| || |||||| Sbjct 7757 AGGGAGTCCCAGTCCCACAGGTCGGTAGGAGTGACGCC-----CCACATGTCGTACTGGA 7703 Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179 | || | ||| |||| |||||||| | |||||||| | ||| | | || |||| Sbjct 7702 GCTCGCCCTTGGACACTGGAGATCCCTCGTAGGTCTCGTACGTGCCGTGGATCTGGGCCA 7643 Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239 | || | || | || |||| || || |||||||| || | | || | Sbjct 7642 ACTCAACGGATGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGT 7583 Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299 ||| |||||| |||||| || | || ||| | ||| |||| || ||||| | Sbjct 7582 GCTTAGCCTCGGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCT 7523 Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGG 114356 ||||||||| ||| ||| | || | | || | || || |||| |||| Sbjct 7522 GGACACCGACAGCAACTGGTCTGTGACGGAAGTT---GCTGCGCCTGGCCTCCTCGACGG 7466 Query 114357 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 114416 | || | || ||| |||| | | || || || || ||||||| ||||| || | Sbjct 7465 GGTAGTAGTTGACATCAATAATCTTGTTCAGGTTCTTAACAACAACCTGTGTGACCTCGT 7406 Query 114417 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTG 114476 ||||||| | | | || | ||| | | | || ||| | |||||||| | | Sbjct 7405 GAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACGTACGTTGGAAGGGCAAGGG 7346 Query 114477 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACA 114536 | |||| |||||||| | |||||| | ||| |||||| | ||| ||||| |||| Sbjct 7345 ATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCACA 7286 Query 114537 AATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 114596 || || || ||||| || | |||||| || || ||| ||| || ||||||| Sbjct 7285 GGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCT 7226 Query 114597 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CA 114655 |||| | |||| | || | || ||||| || || |||| |||||| | | ||| | | Sbjct 7225 TGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCT 7166 Query 114656 TCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC---CTCGTACTTTGTGTAGAGG 114712 || | | || | ||| ||| | | || ||| |||||| || |||||| Sbjct 7165 TCTGGGCCTTG----ATGGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGA 7110 Query 114713 GCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAG 114771 || || ||||| ||||| | || | | || || || || | ||||| | ||| Sbjct 7109 GCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGG-GCATTCGTTGGGGCACATGAG 7051 Query 114772 AGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGA 114831 || ||| | ||| || ||||||||||||||||||||| || |||||||||||||| | Sbjct 7050 AGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTA 6991 Query 114832 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 114891 ||| | || || || |||| || | || || || | ||| ||||| || || Sbjct 6990 GAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTC 6931 Query 114892 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ 114945 | || ||| |||||||| || || | || | |||| | || | | || Sbjct 6930 GAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACC---AGGGCGCTTGTT 6874 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| |||||| || || || || ||| || || ||||| ||||| |||| |||||| Sbjct 6873 GCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACC 6814 Query 115006 ATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTG 115065 | || | || || || || ||| | |||| | || | |||||||| Sbjct 6813 GTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTT 6754 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 || || ||||| || || ||||||||| || || | |||| || | ||||| Sbjct 6753 CAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGAT 6694 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TG 115184 || || || || |||| | ||| | ||||||| |||| || ||||| || Sbjct 6693 ACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTG 6635 Query 115185 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTT 115242 |||||||||| |||||||| ||||| | ||||| |||| || |||| ||||| Sbjct 6634 GTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAA-GTA-TTTGGAAGACATGAG 6577 Query 115243 ATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 | ||| ||||| | | | ||| || || |||||||| || | || || ||||| Sbjct 6576 GTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCAT 6517 Query 115303 AAACATGTATTGGGGTGTTTC 115323 || ||||| || || |||| Sbjct 6516 AATCATGTGCTGTGGCCTTTC 6496 >seq2510 Length=23295 Score = 134 bits (148), Expect = 2e-26 Identities = 341/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||||||||| || ||||||||||| || || ||||| || || | ||||||||| Sbjct 9671 GTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCAGCCATGAGACC 9612 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | ||||||||| | || || || ||||||||||| ||||| || Sbjct 9611 ACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGC 9552 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTTCATCG 126236 ||||| |||| || |||| ||||||| | | | |||| | | |||| | | | Sbjct 9551 AGCGAAGGCAACCAGGCGCTGGGCAAAGGTG-GAATCCTTGTCTTGGATCCACCTGACAG 9493 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 126296 |||| | ||||| |||| ||| || |||| ||||| ||| || | ||||| | | Sbjct 9492 CCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGAGGTATGTGC 9433 Query 126297 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 126356 | | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 9432 GCTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 9373 Query 126357 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 | || || ||| || || ||||||| |||| || || || || ||||| | Sbjct 9372 TCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCTGGGATTTGAACCTC-GCT 9315 Query 126416 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 126474 || || | | || ||||| |||||||| || ||| | || || || || || Sbjct 9314 GCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAG 9255 Query 126475 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATC 126531 | | ||||| | | |||| || || | || | |||||||||| ||| || Sbjct 9254 AACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTTCCAGTCGTGAAGGTC 9195 Query 126532 CTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||| ||||| || | |||||| |||||||| Sbjct 9194 CTTGGAGAGGTCAATCTCCTCTGCAGTCCA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597328667954120