Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1479 259 5e-64 >seq1479 Length=10203 Score = 259 bits (286), Expect = 5e-64 Identities = 964/1492 (65%), Gaps = 32/1492 (2%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| |||| || || ||||| || || || || | | ||| |||| || || ||| || Sbjct 6604 GCCTCCCCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTG 6663 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | ||| | |||| || || || || | |||| |||||| ||||| | Sbjct 6664 GTCGAC-ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCAT 6722 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGT 94068 |||||||| || || || ||||| | | |||| |||| ||||||| ||| Sbjct 6723 GATCTCAAAGACTGCCGGAGGTATCGGATTGAACATCCAT--CGTATCCGTGCCACCGGT 6780 Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 | ||||| ||||||||| || | ||| ||||| |||| || |||||||| |||||| Sbjct 6781 GCATACATTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTC 6840 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 |||||| | || | ||||| ||||||||||| | | | ||| | ||||| || Sbjct 6841 AACAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATC 6900 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 ||| | ||||| |||||||| || || | ||| | ||| || | |||||||||||| Sbjct 6901 TATGTTGAGCCATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGC 6960 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || | | ||| | ||| | ||||||||||||||| | || || || || ||| Sbjct 6961 AAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATG 7020 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || || || ||||| ||| | ||||| ||| | || ||||| ||||| || ||| || Sbjct 7021 AAGCGTGTTGAGAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTG 7080 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAA 94427 | ||||||| || | | || || || | || | ||||| ||| || || Sbjct 7081 GCGGACGTTTACGG-TGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAA 7139 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | ||| || | || |||||| ||| | || | || ||| || Sbjct 7140 GGGTCGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGA 7199 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || | || | ||| |||| |||||| || |||| |||| ||||||| || | Sbjct 7200 GACAGGAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAA 7259 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 |||||| ||| ||||| || |||||||| |||||||||||||| || |||| || Sbjct 7260 CCTCGGTACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGA 7319 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 ||| |||| ||||||||| ||| ||| | ||| | || | ||| || ||| | | Sbjct 7320 TGAGGTTGCCGTGTGTAACTTGGCATCCCTTGCCCTTCCAACGTACGT-TGACATGGCCA 7378 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727 ||| | | | ||| | || ||||| | || | ||| || | || Sbjct 7379 -ACGGC-------ACATACGACTTCCAGAAGCTTCACGAGGTCAC--ACAGGTTGTTGTT 7428 Query 94728 --GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 ||||||||||| | | || || |||| |||||||||| |||||| | | Sbjct 7429 AAGAACCTGAACAAGATTATTGATGTCAACTACTACCCCGTCGAGGAGGCCAGGCGCAGC 7488 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| | || | || | | |||| ||||||||| | || || || | || Sbjct 7489 AACTTCCGTCACAGACCAGTTGCTGTCGGTGTCCAGGGTCTTGCTGATGCATTCTTGGCC 7548 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 | || ||||||| ||| || ||| || | | || | | || || || | | Sbjct 7549 CTCCGCCTGCCCTTCGATTCCCCCGAGGCTAAGCACCTCAACTCCCAGATCTTTGAGACC 7608 Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGG-CCAGATCGGACGGCGGGCCACA 94964 || || |||| || ||| |||||| | |||| ||||||| ||||| | | Sbjct 7609 ATCTACCACGGTGCTTTGACTGCATCCGTTGAGTTGGCCCAGATC-CACGGC---ACGTA 7664 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 ||| | | | ||||| || || ||||| | |||| |||| | ||||| || Sbjct 7665 CGAGACCTACGAGGGATCTCCAGTGTCCAAGGGCGAGCTCCAGTACGACATGTGGGGCGT 7724 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGT 95082 | || | | |||| |||||||| ||| | | | || | | | |||||| Sbjct 7725 CACTCCTACCGACCTGTGGGACTGGGACTCCCTCAAGGTCCAGA--TCAAGCAGCACGGT 7782 Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142 || ||| | || || || || ||||||||||| || || || | ||||| || ||| Sbjct 7783 GTCCGCAACTCCCTTCTCGTTGCGCCCATGCCCACTGCTTCGACCTCCCAGATTCTCGGC 7842 Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202 |||||||| ||||| || | |||||| ||| | ||| | || || || || || Sbjct 7843 TTCAACGAGTGCTTCGAGCCATACACCTCGAACATCTACTCGCGCCGTGTCCTGGCTGGT 7902 Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGG 95261 || |||| || ||||| | || ||| | | || | |||| ||||| Sbjct 7903 GAGTTCCAAGTTGTCAACCCTTGGTTGCTCAAAGACTTGGTCGAC-ATGGGACTGTGGTC 7961 Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321 |||||| | ||||||| | | | | || ||| ||||||||||||| | || Sbjct 7962 TGACAACATGAAGAACCGCATCATTGCGGACGGAGGATCCATCCAGAACATCCCCAACAT 8021 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 |||| || |||||||| ||||||||||| || ||||||||| | |||||| Sbjct 8022 CCCGGCCGATATCAAGGCTCTCTACAAGACGGTCTGGGAGATCTCCCAGCGC 8073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494702551490440