Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 120 3e-22
seq2510 113 4e-20
seq1537 91.5 1e-13
>seq1071
Length=16463
Score = 120 bits (132), Expect = 3e-22
Identities = 145/194 (75%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| || | | |||||||| || || |||| |
Sbjct 873 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCGAA 932
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
||| || ||||| |||||||| || ||||| || || || ||| | |||| |||| |
Sbjct 933 GATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATC-CTGAATCTTTGACTTAACGT 991
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | |||||| | ||||| ||||||| || | || || ||||||| || ||
Sbjct 992 TG-TCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTG 1050
Query 138601 ACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 1051 ACAAAAATCTGCAT 1064
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| ||| || || | | |||||||| ||||||||||| ||| |
Sbjct 1294 CCACCACGCAGACGCAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGAC 1353
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || || ||||| | | |||| || ||||| |||||||| ||
Sbjct 1354 AAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 1413
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || || || ||| || || | | || | ||| |||| || ||||||
Sbjct 1414 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATGATTCCACC 1473
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | ||| || || || ||||| || || |||||||||||
Sbjct 1474 TCAAGCGTGATCGTCTTCCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||||||| ||| || ||||| | || || || |
Sbjct 1555 GACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAACTGCTTGCCCGCG 1614
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
| || | ||||| ||||||||||| || || || ||||| ||| | || | ||
Sbjct 1615 AAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC-CTGAATCTTCGACTTCAC 1673
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | ||||| | |||||| ||||| | || | || || |||||||| || |
Sbjct 1674 ATTG-TCGATAGTGTCAGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCT 1732
Query 138599 TTACAAAAATCTGCAT 138614
| || |||||||||||
Sbjct 1733 TGACGAAAATCTGCAT 1748
>seq2510
Length=23295
Score = 113 bits (124), Expect = 4e-20
Identities = 493/765 (64%), Gaps = 29/765 (4%)
Strand=Plus/Plus
Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145
|| || || |||||||| || ||| ||||| | || ||||||||||| | || |
Sbjct 9222 AATGACGATGAGCGCTACTTCATCTCCCACGTTCTCGCTTTCTTCGCCGCGTCTGACGGA 9281
Query 52146 ATCGTGAACATTAACCTCATCGAGTACAT--GCAGCGGAACGTTCCGGAACTC---GAGG 52200
|| || ||| |||||| ||||| | | |||||| | |||| || || ||||
Sbjct 9282 ATTGTCAACGAGAACCTCCTCGAGCGCTTCAGCAGCG--AGGTTC---AAATCCCAGAGG 9336
Query 52201 CGCAATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATC 52260
| | | ||| || ||| ||| | | |||||| | | ||| | |||| ||| |
Sbjct 9337 CCCGCTGCTTCTACGGTTTCCAAATCATGATCGAGAACATTCACGCCGAGACATACTCCC 9396
Query 52261 TGCTCATTGAGCAGCT-GATAAAAGATGAGCACGAGCGCGACA-CGCTGCTGAATGCGTT 52318
| ||||| || || | || || || || | ||||| ||| || | ||||| |
Sbjct 9397 TCCTCATCGA-CACATACATCAAGGAGCAGGCCCAGCGC-ACATACCTCTTCAATGCCAT 9454
Query 52319 CGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGA 52378
|||| | | || ||| | || ||||| | ||||| | | ||||||| | ||
Sbjct 9455 CGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGGTGGATCCA---AGA 9511
Query 52379 CACCG---CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGttttt 52435
|| | |||| | ||| ||||| |||| |||||||| || ||||| | || ||
Sbjct 9512 CAAGGATTCCACCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTT 9571
Query 52436 ttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGAC 52495
|||||| || ||| | || || | | || | | || | ||| | ||||| ||
Sbjct 9572 CTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTCAC 9631
Query 52496 GTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTA 52555
||| ||||||| | || || ||||| || || || ||||| ||||| || ||||||
Sbjct 9632 TTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCACACTGACTTCGCCTGCCTCCT 9691
Query 52556 CTACAAG-ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGT--TCAA 52612
|| | | || | |||| || | | | | | ||| || |||| |||
Sbjct 9692 CTTCTCGCACCTTAGACACCGCCCAA--GCA--AGCAGGCTGTCC--AGGATGTCATCAC 9745
Query 52613 GGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGG 52672
||||| || || ||||| | ||||| || || | || || || | |||||| ||
Sbjct 9746 CGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACAGAGGCACTCCCATGTGCGCTGCTCGG 9805
Query 52673 CATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCA 52732
||||||||| | | ||| | ||||| ||||| || || || | ||| || |
Sbjct 9806 CATGAACGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTTTC 9865
Query 52733 GCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTC 52792
||||| | |||| || ||| || ||| || || || || ||| | ||||| ||
Sbjct 9866 TCTCGGTAACGAGAAGTTCTACAAGTCTACCAACCCCTTCGACTTCATGGAGAACATCTC 9925
Query 52793 GCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| | || ||||||||||| || |||||||| |||| ||| ||
Sbjct 9926 CCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTA 9970
>seq1537
Length=49637
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | || || |||||||| || || ||||
Sbjct 26422 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 26481
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 26482 AAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 26541
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
|||| | | ||||||| |||||||||||| | || | || || || ||||| || ||
Sbjct 26542 TTGT-CGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 26600
Query 138600 TACAAAAATCTGCATGGCT 138618
|| || || |||||| ||
Sbjct 26601 CACGAAGATTTGCATGACT 26619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496241687248080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |