Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 98.7 9e-16
>seq1071
Length=16463
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| | || || ||||| ||||| || |||||
Sbjct 1063 ATACCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCA 1122
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | || || || ||| | |||| || |||||||||||
Sbjct 1123 GACAAAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 1182
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || ||||||||||| || |||| || | || | ||| || || |||||
Sbjct 1183 GGGATGCCCTCCTTATCTTGAATCTTGGACTTGA-CGTTATCGATGGTATCCGACGACTC 1241
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| || |||| || || ||||| ||||| || || || ||||||||
Sbjct 1242 GACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1292
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || | ||| || | || || || ||| |
Sbjct 874 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCGAAG 933
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
|||| || ||||||||||| || || || || ||||| |||| | |||| | | || |
Sbjct 934 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA-TCTTTGACTTAACGTT 992
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| |||||||| || |||||||||| || || || || | || || ||
Sbjct 993 GTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGAC 1052
Query 45329 AAAAATTTGCAT 45340
|||||| |||||
Sbjct 1053 AAAAATCTGCAT 1064
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||| || || || || ||||| | || | ||| ||||| ||
Sbjct 1546 TGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAACTGC 1605
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | ||||| || ||||||||||| |||||||| || || || ||||| ||
Sbjct 1606 TTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTC 1665
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | ||||| || ||||| || || | ||| | || ||||| ||
Sbjct 1666 GACTTCACATTGTCGATAGTGTCAGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTC 1725
Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340
|| || || || ||||| |||||
Sbjct 1726 AGGGTCTTGACGAAAATCTGCAT 1748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451984334516440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |