Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1479 280 2e-70 seq2510 140 4e-28 >seq1479 Length=10203 Score = 280 bits (310), Expect = 2e-70 Identities = 1128/1757 (64%), Gaps = 57/1757 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| || |||||||| || | ||||| |||| Sbjct 8225 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTG 8166 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | |||||| | |||| || ||| | ||||| |||||||||||| Sbjct 8165 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATGAAG 8106 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734 || || || || ||||| | | || || | | || | || ||||| || || Sbjct 8105 GCACCACGGTCAGCGGCCATCTGGA-CA-ATGGTGCG-CTGGGAGATCTCCCAGACCGTC 8049 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 ||||||| ||| ||||| | ||||| | ||| || ||||| || || || || Sbjct 8048 TTGTAGAGAGCCTTGATATCGGCCGGGATGTTGGGGATGTTCTGGATGGATCCTCCGTCC 7989 Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCT--------TCTTGAGAT 115846 | ||| | | |||||| | | ||||| || || || | |||| || Sbjct 7988 GCAATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTT-GAG 7930 Query 115847 CCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGA 115906 | ||| | | |||||||| |||||||| || ||| || | | |||| Sbjct 7929 CAACCAAGGG-------TTGACAACTTGGAACTCACCAGCCAGGACACGGCGCGAGTAGA 7877 Query 115907 TGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTG 115966 |||| | ||||||||||| |||||||| ||| || | || |||| || || || | Sbjct 7876 TGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCAG 7817 Query 115967 TGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGA 116026 |||||||||| || | ||||||| |||||||| ||| | | | || | |||||| Sbjct 7816 TGGGCATGGGCGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTGA 7757 Query 116027 GGGCGTCCCAGTCGTA---GTTG--AGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||||||||| | || | || || | |||| |||| || ||||||| Sbjct 7756 GGGAGTCCCAGTCCCACAGGTCGGTAGGAGTGACGCCCC-----ACATGTCGTACTGGAG 7702 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 || | |||| |||| |||||||| | ||||| || | ||| | | || ||||| Sbjct 7701 CTCGCCCTTGGACACTGGAGATCCCTCGTAGGTCTCGTACGTGCCGTGGATCTGGGCCAA 7642 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 || | || | || |||| || || |||||||| || | | || | Sbjct 7641 CTCAACGGATGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGTG 7582 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| |||||| |||||| || | || ||| | ||| |||| || ||||| || Sbjct 7581 CTTAGCCTCGGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCTG 7522 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 116318 |||||||| ||| ||| | || | | || | || || |||| ||||| Sbjct 7521 GACACCGACAGCAACTGGTCTGTGACGGAAGTTGC---TGCGCCTGGCCTCCTCGACGGG 7465 Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378 || | || ||| |||| | | || || || || ||||||| ||||| || || Sbjct 7464 GTAGTAGTTGACATCAATAATCTTGTTCAGGTTCTTAACAACAACCTGTGTGACCTCGTG 7405 Query 116379 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 116438 |||||| | | | || | ||| | | | || ||| | |||||||| | || Sbjct 7404 AAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACGTACGTTGGAAGGGCAAGGGA 7345 Query 116439 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 116498 |||| |||||||| | |||||| | ||| |||||| | ||| ||||| |||| Sbjct 7344 TGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCACAG 7285 Query 116499 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 116558 || || || ||||| || | |||||| || || ||| ||| || |||||||| Sbjct 7284 GTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTT 7225 Query 116559 GTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CAT 116617 ||| | ||| | || | || ||||| || || |||| |||||| | | ||| | | | Sbjct 7224 GTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTT 7165 Query 116618 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCC---TCGTACTTTGTGTAGAGGG 116674 | | | || | ||| ||| | | || |||| ||||| || |||||| | Sbjct 7164 CTGGGCCTTGA----TGGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAG 7109 Query 116675 CCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGA-CAGAAGAGA 116733 |||| ||||| ||||| | | || | | || || || || ||| || | |||| Sbjct 7108 CCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGG-GCATTCGTTGGGGCACATGAGA 7050 Query 116734 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 116793 | ||| | ||| || |||||| |||||||||||||| || ||||||||||| || || Sbjct 7049 GTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAG 6990 Query 116794 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 116853 || | || || || |||| || | || || || | ||| ||||| || || Sbjct 6989 AACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTCG 6930 Query 116854 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCA 116910 | || ||| |||||||| || || | || | |||| | || ||| ||| Sbjct 6929 AAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCGCTTGTTGCCA 6870 Query 116911 GCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCA 116970 |||||| || || || || || ||| || ||||| ||||| |||| |||||| | Sbjct 6869 CCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTC 6810 Query 116971 GATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATA 117030 || | || || || || ||| | | |||| | || | ||||||| || Sbjct 6809 GAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAAT 6750 Query 117031 CCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCA 117090 || ||||| || || ||||||||| || || | |||| || | ||||| || Sbjct 6749 CCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCC 6690 Query 117091 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGT 117149 || || || |||| | ||| | ||||||| |||| || ||||| |||||| Sbjct 6689 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGT 6631 Query 117150 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTTATCG 117207 |||||| |||||||| ||||| | ||||| |||| || |||| ||||| | | Sbjct 6630 ACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTG 6573 Query 117208 TAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAAC 117267 || ||||| | | | ||| || || |||||||| || | | || ||||||| | Sbjct 6572 TATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATC 6513 Query 117268 ATGTATTGGGGTGTTTC 117284 |||| || || |||| Sbjct 6512 ATGTGCTGTGGCCTTTC 6496 >seq2510 Length=23295 Score = 140 bits (154), Expect = 4e-28 Identities = 342/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||||||||| || ||||||||||| || || ||||| || || | ||||||||| Sbjct 9671 GTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCAGCCATGAGACC 9612 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 9611 ACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGC 9552 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 ||||| |||| || |||| |||||||| | | | |||| | | |||| | | | Sbjct 9551 AGCGAAGGCAACCAGGCGCTGGGCAAAGGTG-GAATCCTTGTCTTGGATCCACCTGACAG 9493 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769 |||| | ||||| |||| ||| || |||| ||||| ||| || | ||||| | | Sbjct 9492 CCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGAGGTATGTGC 9433 Query 127770 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 127829 | | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 9432 GCTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 9373 Query 127830 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 127888 | || || ||| || || ||||||| |||| || || || || ||||| | Sbjct 9372 TCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCTGGGATTTGAACCTC-GCT 9315 Query 127889 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 127947 || || | | || ||||| |||||||| || ||| | || || || || || Sbjct 9314 GCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAG 9255 Query 127948 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATC 128004 | | ||||| | | |||| || || | || | |||||||||| || || Sbjct 9254 AACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTTCCAGTCGTGAAGGTC 9195 Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| ||||| || | |||||| |||||||| Sbjct 9194 CTTGGAGAGGTCAATCTCCTCTGCAGTCCA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613481593743240