Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1479 120 5e-22 >seq1479 Length=10203 Score = 120 bits (132), Expect = 5e-22 Identities = 318/473 (67%), Gaps = 22/473 (5%) Strand=Plus/Minus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 || |||||| ||||||||| || | |||||||||| |||||| || |||| |||| Sbjct 7257 CTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTC 7198 Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045 ||||||| ||| |||||| | ||| | | | |||| | ||||| | | Sbjct 7197 AGTCTGAGACTCG-AGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCT 7139 Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105 | | || | ||||||||||| ||| || ||| | || ||| |||||| |||||| Sbjct 7138 T-CTTCTCC---GACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCC 7083 Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCA--CATCTGATCGTCTTTCACCC 205163 || || || |||| ||||| ||||| |||| ||| || | | || || | || | Sbjct 7082 GCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCA-CCGTTCTTC-TCAACAC 7025 Query 205164 TCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGT 205223 || ||| || || || |||||| || |||| |||| |||||||| | | | | | Sbjct 7024 GCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCT 6965 Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282 | | || ||||||| ||||||||| || || | | || |||||||| ||||| Sbjct 6964 CCTTGCCGTGGTTCTTCCTCAAGTCCA-AGAACTCGAAGACATCAGCGTGCCATGGCTCA 6906 Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC---CATGCGAGTC 205339 | | | ||| | || || || | |||||| ||||||||||| || || ||| Sbjct 6905 ACATAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTG 6846 Query 205340 ATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392 | |||||| || || ||||| || || | |||||| | | | ||||| || Sbjct 6845 TT---GTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGT 6796 Score = 118 bits (130), Expect = 2e-21 Identities = 369/566 (65%), Gaps = 4/566 (1%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 || ||| || |||||||| || | | ||| | | || | | || ||||||||||| Sbjct 8268 CTGGTCGACGGTGAACTGGATAGGAGCCGAGGCGGCCATGGTACGGAGGTAGTACATGCC 8209 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 |||||| ||||| || ||| || | ||||||||| | | |||| || | || Sbjct 8208 GGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTGATCTTGCCCATTGTTGG 8149 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 ||| |||||| ||||| || |||||| || |||||| ||||| || || || |||| Sbjct 8148 GTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG-AAGGCACCACGGTCAGCGG 8090 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 |||| | || |||||| ||| || |||||||| ||||||||| | | | || | | Sbjct 8089 CCATCTGGACAATGGTGCGCTGGGAGATCTCCCAGACCGTCTTGTAGAGAGCCTTGATAT 8030 Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 || | | | | || || ||| || || ||| || || | | || || Sbjct 8029 CGGCCGGGATGT-TGGGGATGTTCTGGATGGATCCTCCGTCCGCAATGATGCGGTTCTTC 7971 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 | | || ||||| |||| || || || | || ||||||| | Sbjct 7970 ATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTTGAGCAACCAAGGGTTGACAACT 7911 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256 || || || || | ||| || | || | | | | ||| |||| |||| ||||| | Sbjct 7910 TGGAACTCACCAGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCAC 7851 Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316 |||||| ||||| |||||| | ||| || ||||||||||| || | ||| |||||| Sbjct 7850 TCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCAGTGGGCATGGGCGCAACGAGAAGGGAG 7791 Query 204317 TTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTG 204376 ||||| ||||||| | | || | | ||| || ||| |||||| || | | Sbjct 7790 TTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGGGAGTCCCAGTCCCACAGGTCGGTA 7731 Query 204377 GGTTTCACGCCCCACATGTCGAACTG 204402 || | ||||||||||||||| |||| Sbjct 7730 GGAGTGACGCCCCACATGTCGTACTG 7705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795122012209840