Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 120 5e-22
>seq1479
Length=10203
Score = 120 bits (132), Expect = 5e-22
Identities = 318/473 (67%), Gaps = 22/473 (5%)
Strand=Plus/Minus
Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990
|| |||||| ||||||||| || | |||||||||| |||||| || |||| ||||
Sbjct 7257 CTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTC 7198
Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045
||||||| ||| |||||| | ||| | | | |||| | ||||| | |
Sbjct 7197 AGTCTGAGACTCG-AGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCT 7139
Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105
| | || | ||||||||||| ||| || ||| | || ||| |||||| ||||||
Sbjct 7138 T-CTTCTCC---GACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCC 7083
Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCA--CATCTGATCGTCTTTCACCC 205163
|| || || |||| ||||| ||||| |||| ||| || | | || || | || |
Sbjct 7082 GCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCA-CCGTTCTTC-TCAACAC 7025
Query 205164 TCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGT 205223
|| ||| || || || |||||| || |||| |||| |||||||| | | | | |
Sbjct 7024 GCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCT 6965
Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282
| | || ||||||| ||||||||| || || | | || |||||||| |||||
Sbjct 6964 CCTTGCCGTGGTTCTTCCTCAAGTCCA-AGAACTCGAAGACATCAGCGTGCCATGGCTCA 6906
Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC---CATGCGAGTC 205339
| | | ||| | || || || | |||||| ||||||||||| || || |||
Sbjct 6905 ACATAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTG 6846
Query 205340 ATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392
| |||||| || || ||||| || || | |||||| | | | ||||| ||
Sbjct 6845 TT---GTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGT 6796
Score = 118 bits (130), Expect = 2e-21
Identities = 369/566 (65%), Gaps = 4/566 (1%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898
|| ||| || |||||||| || | | ||| | | || | | || |||||||||||
Sbjct 8268 CTGGTCGACGGTGAACTGGATAGGAGCCGAGGCGGCCATGGTACGGAGGTAGTACATGCC 8209
Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958
|||||| ||||| || ||| || | ||||||||| | | |||| || | ||
Sbjct 8208 GGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTGATCTTGCCCATTGTTGG 8149
Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017
||| |||||| ||||| || |||||| || |||||| ||||| || || || ||||
Sbjct 8148 GTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG-AAGGCACCACGGTCAGCGG 8090
Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077
|||| | || |||||| ||| || |||||||| ||||||||| | | | || | |
Sbjct 8089 CCATCTGGACAATGGTGCGCTGGGAGATCTCCCAGACCGTCTTGTAGAGAGCCTTGATAT 8030
Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136
|| | | | | || || ||| || || ||| || || | | || ||
Sbjct 8029 CGGCCGGGATGT-TGGGGATGTTCTGGATGGATCCTCCGTCCGCAATGATGCGGTTCTTC 7971
Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196
| | || ||||| |||| || || || | || ||||||| |
Sbjct 7970 ATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTTGAGCAACCAAGGGTTGACAACT 7911
Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256
|| || || || | ||| || | || | | | | ||| |||| |||| ||||| |
Sbjct 7910 TGGAACTCACCAGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCAC 7851
Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316
|||||| ||||| |||||| | ||| || ||||||||||| || | ||| ||||||
Sbjct 7850 TCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCAGTGGGCATGGGCGCAACGAGAAGGGAG 7791
Query 204317 TTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTG 204376
||||| ||||||| | | || | | ||| || ||| |||||| || | |
Sbjct 7790 TTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGGGAGTCCCAGTCCCACAGGTCGGTA 7731
Query 204377 GGTTTCACGCCCCACATGTCGAACTG 204402
|| | ||||||||||||||| ||||
Sbjct 7730 GGAGTGACGCCCCACATGTCGTACTG 7705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795122012209840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |