Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1537 141 2e-28
seq1071 136 9e-27
seq1847 93.3 1e-13
>seq1537
Length=49637
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| ||| | ||| ||||| |||||||| |||| ||||||||| | | ||
Sbjct 26395 CGAAGTCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 26454
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct 26455 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCC 26514
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| ||||| | | || || || |
Sbjct 26515 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGG 26574
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| ||||| || || ||||| || |||||
Sbjct 26575 GTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTG 26612
>seq1071
Length=16463
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || | ||| ||||| |||||||| || | |||||| || | ||| ||
Sbjct 1300 CGCAGACGCAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTG 1359
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||||||||| || || ||||| || |||||||||||||| || ||
Sbjct 1360 CGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCC 1419
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||||| || | ||| || | || ||| || || | |
Sbjct 1420 TCCTTATCCTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATGATTCCACCTCAAGC 1479
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| ||||| ||||| || || ||||| ||
Sbjct 1480 GTGATCGTCTTCCCCGTAAGAGTCTTGACGAAAATCTG 1517
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| | |||||||||||||||||| || | ||||||||| || |||
Sbjct 1528 CGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTG 1587
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| |||| |||||| || ||||| || | ||||||||||||||| ||| ||
Sbjct 1588 CGACCATCCTCCAACTGCTTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCC 1647
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| |||||| |||| ||||| | | || || |||||
Sbjct 1648 TCCTTGTCCTGAATCTTCGACTTCACATTGTCGATAGTGTCAGACGACTCAACCTCCAAA 1707
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || || || ||||| ||
Sbjct 1708 GTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTG 1745
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||| || | || |||||||| |||| |||||| |||| |||||| | |||||
Sbjct 1081 AGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCATCC 1140
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || ||||| || || |||||||||||||| || || || ||
Sbjct 1141 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 1200
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||| || | | || || |||| ||| || |||
Sbjct 1201 TGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 1260
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| || || || |||||
Sbjct 1261 TTTCCGGTGAGAGTCTTGACGAAGATTTG 1289
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| ||||| |||||| |||| ||||||||| || |||
Sbjct 844 CGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTC 903
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| ||||| || |||||||| ||||||||||| || |||||||||||||| || ||
Sbjct 904 CTCCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACCC 963
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| |||||||||||| ||| ||| || | |||||||| | || || || |
Sbjct 964 TCCTTATCCTGAATCTTTGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAGA 1023
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || | || || |||||||| ||
Sbjct 1024 GTAATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTG 1061
Score = 100 bits (110), Expect = 7e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | |||||| || |||||||| |||| ||||||||| | | || | || ||
Sbjct 1765 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1824
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||||||||||||||| ||||| ||||||||||| |||||| || ||
Sbjct 1825 TCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 1884
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| || || | | || || || | ||||| |||
Sbjct 1885 TGGATCTTGCTCTTAACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTC 1944
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 1945 TTGCCAGTGA 1954
>seq1847
Length=30800
Score = 93.3 bits (102), Expect = 1e-13
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| | | ||| | |||||| || |||||||| || || ||||
Sbjct 17777 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGA 17718
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||||||||||||| |||||| || ||||| ||||| ||| || |
Sbjct 17717 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 17658
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||| || || | | || || || | ||||| ||||| |||||
Sbjct 17657 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 17612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178871164628713
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |