Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2510 277 2e-69
seq1537 120 3e-22
seq1071 118 1e-21
seq1847 96.9 3e-15
>seq2510
Length=23295
Score = 277 bits (306), Expect = 2e-69
Identities = 584/863 (68%), Gaps = 25/863 (3%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| ||||| || ||| | || |||||||| || || || ||||| |
Sbjct 9989 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 9930
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707
|| ||| ||| | ||| || || |||||||||| | |||||| ||| | | ||
Sbjct 9929 CAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTACC 9870
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767
|| || | |||||||||||||| |||||||| ||||||||| ||| | |
Sbjct 9869 GAG-AGAAAGC--AGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 9813
Query 132768 ATTAAGTCCCAGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826
|| | || ||||| ||||| || || || || || | || ||||||||| ||||
Sbjct 9812 GTTCATGCCGAGCAG-CGCACATGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGA 9754
Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886
| || ||||||| || ||| || | | ||| || || || | ||| ||
Sbjct 9753 CAGCCTCGGTGATGACATCCTGGACAGCCTGCTTGCTTGGGCGGTGTCTAAGGTGCGAGA 9694
Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946
| | | ||| || ||||| || | ||||| || | ||| ||||| |||||| ||
Sbjct 9693 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGA 9634
Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006
|||| | ||| | |||||| || || || |||||||| || || | |||||| ||| |
Sbjct 9633 AAGTGAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGG 9574
Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066
| ||||||| ||||| ||||| ||||| || |||||||||| | | || |||| || |
Sbjct 9573 AGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCT 9514
Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125
|| || | |||||| | | ||||| |||||||| | |||| ||| || || || |||
Sbjct 9513 TGTCTTG-GATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCG 9455
Query 133126 ATGGCGTTCAACA------AACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATG 133179
||||| || || | || | || ||| | | ||| |||||||||
Sbjct 9454 ATGGCATTGAAGAGGTATGTGCGCTGGGCCTGCTCCTTG------ATGTATGTGTCGATG 9401
Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239
||| || || | || | ||| | |||||| || |||||| || ||||| |||||
Sbjct 9400 AGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 9341
Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299
|| ||||| | || || || ||| ||||||| || || |||||||| ||
Sbjct 9340 CGGGCCTCTGGGATTTGAACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATT 9281
Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359
||||| |||||||| || || || ||||| |||||| | |||||| | ||| ||
Sbjct 9280 CCGTCAGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTG 9221
Query 133360 AAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAAC 133416
| || | ||||||| | ||||||||| ||||| | |||||| | ||||| ||
Sbjct 9220 AGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCAGTCCAGAAA 9161
Query 133417 GACGCCTCGGCTTTTTTGTACAT 133439
||||| || || || ||||||||
Sbjct 9160 GACGCTTCCGCCTTCTTGTACAT 9138
>seq1537
Length=49637
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || |||||||| || |||||| | || || ||| | ||
Sbjct 26615 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 26556
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || |||| ||||| |||||||||||| | |||||
Sbjct 26555 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 26496
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| ||||| || || | |||||||| |||||||||
Sbjct 26495 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 26436
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
||||| ||||| | || || || |||||
Sbjct 26435 ATCCAGAAGGAGTCCACTCTTCACTTGGT 26407
>seq1071
Length=16463
Score = 118 bits (130), Expect = 1e-21
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||| ||||| ||||||||| | || |||||| || |||| | | | | ||||
Sbjct 1954 TCACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATCGACAATGTTAAGA 1895
Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| ||||| |||||||||||| | ||||| || || || || | ||| || |
Sbjct 1894 GCAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAA 1835
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| || || || |||| ||||||||| ||||||||||||||| ||||| | || || |
Sbjct 1834 AGCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCC 1775
Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470
| ||||| || ||| || | || ||
Sbjct 1774 ACTTGGTCCTCCGTCTGCGTGGTGG 1750
Score = 105 bits (116), Expect = 7e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| |||||||| | || || ||| | |
Sbjct 1748 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCT 1689
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || || | ||||| ||||| ||||| | |||||
Sbjct 1688 GACACTATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 1629
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | |||| ||||||||| ||| |||| || | ||||| || | ||||||||||
Sbjct 1628 CAGCGCTTGATTTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTACAAC 1569
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || ||||| |||| || || ||||| || |||
Sbjct 1568 ATTCAGAAGGAGTCGACTCTCCACTTGGTCCTTCGT 1533
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || || || ||||| || |||| || ||| | |
Sbjct 1064 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCA 1005
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| |||| ||| || | || || ||||| || || | |||||
Sbjct 1004 GACACCATTGACAACG-TTAAGTCAAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 946
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || || ||||| || || | | | || || | |||||||||
Sbjct 945 GCAGCGCCTGATCTTCGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAA 886
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| ||| || || || |||||||| ||| | | || ||||
Sbjct 885 CATCCAGAAGGAGAGC-ACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGCC 836
>seq1847
Length=30800
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || | |||||||| ||||||||| | || |||||| || |||| | |
Sbjct 17597 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 17656
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||||||||| | ||||| ||||| ||
Sbjct 17657 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 17716
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || ||||| ||||| || || | ||||| || ||||||||||||||| |||
Sbjct 17717 ATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 17776
Query 38433 G 38433
|
Sbjct 17777 G 17777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500151924037760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |