Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2510 277 2e-69 seq1537 120 3e-22 seq1071 118 1e-21 seq1847 96.9 3e-15 >seq2510 Length=23295 Score = 277 bits (306), Expect = 2e-69 Identities = 584/863 (68%), Gaps = 25/863 (3%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || ||| | || |||||||| || || || ||||| | Sbjct 9989 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 9930 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 || ||| ||| | ||| || || |||||||||| | |||||| ||| | | || Sbjct 9929 CAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTACC 9870 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || || | |||||||||||||| |||||||| ||||||||| ||| | | Sbjct 9869 GAG-AGAAAGC--AGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 9813 Query 132768 ATTAAGTCCCAGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | || ||||| ||||| || || || || || | || ||||||||| |||| Sbjct 9812 GTTCATGCCGAGCAG-CGCACATGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGA 9754 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||||| || ||| || | | ||| || || || | ||| || Sbjct 9753 CAGCCTCGGTGATGACATCCTGGACAGCCTGCTTGCTTGGGCGGTGTCTAAGGTGCGAGA 9694 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | | ||| || ||||| || | ||||| || | ||| ||||| |||||| || Sbjct 9693 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGA 9634 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 |||| | ||| | |||||| || || || |||||||| || || | |||||| ||| | Sbjct 9633 AAGTGAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGG 9574 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| ||||| ||||| ||||| || |||||||||| | | || |||| || | Sbjct 9573 AGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCT 9514 Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 || || | |||||| | | ||||| |||||||| | |||| ||| || || || ||| Sbjct 9513 TGTCTTG-GATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCG 9455 Query 133126 ATGGCGTTCAACA------AACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATG 133179 ||||| || || | || | || ||| | | ||| ||||||||| Sbjct 9454 ATGGCATTGAAGAGGTATGTGCGCTGGGCCTGCTCCTTG------ATGTATGTGTCGATG 9401 Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239 ||| || || | || | ||| | |||||| || |||||| || ||||| ||||| Sbjct 9400 AGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 9341 Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299 || ||||| | || || || ||| ||||||| || || |||||||| || Sbjct 9340 CGGGCCTCTGGGATTTGAACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATT 9281 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 ||||| |||||||| || || || ||||| |||||| | |||||| | ||| || Sbjct 9280 CCGTCAGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTG 9221 Query 133360 AAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAAC 133416 | || | ||||||| | ||||||||| ||||| | |||||| | ||||| || Sbjct 9220 AGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCAGTCCAGAAA 9161 Query 133417 GACGCCTCGGCTTTTTTGTACAT 133439 ||||| || || || |||||||| Sbjct 9160 GACGCTTCCGCCTTCTTGTACAT 9138 >seq1537 Length=49637 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || |||||||| || |||||| | || || ||| | || Sbjct 26615 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 26556 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| |||||||||||| | ||||| Sbjct 26555 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 26496 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | |||||||| ||||||||| Sbjct 26495 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 26436 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||| ||||| | || || || ||||| Sbjct 26435 ATCCAGAAGGAGTCCACTCTTCACTTGGT 26407 >seq1071 Length=16463 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| ||||||||| | || |||||| || |||| | | | | |||| Sbjct 1954 TCACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATCGACAATGTTAAGA 1895 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| |||||||||||| | ||||| || || || || | ||| || | Sbjct 1894 GCAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAA 1835 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | || || || |||| ||||||||| ||||||||||||||| ||||| | || || | Sbjct 1834 AGCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCC 1775 Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470 | ||||| || ||| || | || || Sbjct 1774 ACTTGGTCCTCCGTCTGCGTGGTGG 1750 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| |||||||| | || || ||| | | Sbjct 1748 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCT 1689 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | ||||| ||||| ||||| | ||||| Sbjct 1688 GACACTATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 1629 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||||||||| ||| |||| || | ||||| || | |||||||||| Sbjct 1628 CAGCGCTTGATTTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTACAAC 1569 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| |||| || || ||||| || ||| Sbjct 1568 ATTCAGAAGGAGTCGACTCTCCACTTGGTCCTTCGT 1533 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || || ||||| || |||| || ||| | | Sbjct 1064 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCA 1005 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| ||| || | || || ||||| || || | ||||| Sbjct 1004 GACACCATTGACAACG-TTAAGTCAAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 946 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || ||||| || || | | | || || | ||||||||| Sbjct 945 GCAGCGCCTGATCTTCGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAA 886 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| || || || |||||||| ||| | | || |||| Sbjct 885 CATCCAGAAGGAGAGC-ACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGCC 836 >seq1847 Length=30800 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || | |||||||| ||||||||| | || |||||| || |||| | | Sbjct 17597 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 17656 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||||||||| | ||||| ||||| || Sbjct 17657 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 17716 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||||| || || | ||||| || ||||||||||||||| ||| Sbjct 17717 ATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 17776 Query 38433 G 38433 | Sbjct 17777 G 17777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500151924037760