Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq309 349 4e-91
seq726 113 6e-20
seq1849 96.9 4e-15
>seq309
Length=11567
Score = 349 bits (386), Expect = 4e-91
Identities = 758/1127 (67%), Gaps = 12/1127 (1%)
Strand=Plus/Minus
Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081
||||| || ||||| | ||| |||||||| || |||||||| ||||| || | || ||
Sbjct 2765 ATGGCCGCCTGGACAGCCGCGCCGTATGCAACAGCCTCATCAGGGTTGATGGACTTGTTG 2706
Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141
| || || ||||| || || || | | | | || ||| | ||||| || || ||
Sbjct 2705 GGCTCCTTGCCGTTGAAGTAGTCGGTGATGAGCTTCTGGATTCTTGGGATACGGGTGGAA 2646
Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201
|| ||||| | ||||| || | || || | || |||| ||| | |||| ||
Sbjct 2645 CCTCCGACGAGGACGATCTCGTGGACCTTGGTCTTGTCGAGCTTGGCGTCTGCGAGGACA 2586
Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261
||||| || | | | |||||| | |||| ||||| |||||||| || |||
Sbjct 2585 CGGTCGACGGGCTGGAGAGTGGAACGGAAGAGGTCCTGGCACAGCTCCTCAAAGCGGGCA 2526
Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321
||||| || || || |||||||||| || ||| | | || || || || |||| ||
Sbjct 2525 CGGGTGATAGAGGTGTAGAAATCAATACCCTCGAAGAGAGAGTCGATCTCGATGGAGGTC 2466
Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381
||||| | || || | || ||||| || ||||| || || || || | |||||| |||
Sbjct 2465 TGTGCAGAGGACGAAAGAGTGCGCTTGGCACGCTCGCATGCTGTGCGGAGACGACGGAGG 2406
Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441
||||| | || || | || ||||| || || | || ||||| | ||||||
Sbjct 2405 GCACGGGCATTGGAAGAGAGGTCCTTCTTGTGCTTTCTCTTGAACTCGTTGACGAAGTGG 2346
Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501
| || | ||||| || |||||||||||||| || || || || || | |||
Sbjct 2345 TTGACCAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTG 2286
Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561
|| || |||||||| | || ||| | | | || ||||| || || |||||||| ||
Sbjct 2285 ACCTCGAAGATACCCTCCTCGATGGTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGA 2226
Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621
|| || ||||| ||||| || | || ||||| ||||||||||| || || ||
Sbjct 2225 TCGAAGATGAGAACGTTGCGCTCACCCTCGACCTTCTTGTCGAGACCGTAAGCAATGGCA 2166
Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681
|| || || || || || || ||||| || ||| || || || || | |||||
Sbjct 2165 GCAGCGGTAGGCTCGTTGATGATACGGAGGACGTTGAGTCCGGCGATCAGACCAGCATCC 2106
Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741
|| || || || || || || ||||| ||||| || ||||| || || || |||| ||
Sbjct 2105 TTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAAGCGGGGACGGTGACAACAGCGTTGTTG 2046
Query 7742 AC-TTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800
|| ||| | ||||| || | || ||| | || ||| ||| || | ||| || ||
Sbjct 2045 ACGGTTCCT-CCGAGGTAAGCCTCAGCGGTCTCACGCATCTTGACGAGGATCATGGAGGA 1987
Query 7801 AATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGGGT 7858
||||| || | | || | || || || || || || || || | ||| | ||| |
Sbjct 1986 GATCTCCTCGGGTGTGAAGTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAAAC-TGGCT 1928
Query 7859 TTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGT 7918
| ||| | | | ||| | ||| | | | | ||||| ||| | |||||||
Sbjct 1927 T--TCCTC--CCTTGTCGATGATCTTGAATGGGAAGTGCTTCATGTCGGCCTGGACCTCA 1872
Query 7919 TGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTC 7978
||| | ||||| | ||||| |||||||| || || || || ||||| | ||||||
Sbjct 1871 GCGTCGGCGAACTTGCGACCGATCAGACGCTTGGCGTCGAAGACGGTGTTGCTTGGGTTC 1812
Query 7979 ATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCG 8038
||||| ||||||||| || || || ||||| ||||| || | || || || ||
Sbjct 1811 ATGGCGACTTGGTTCTTGGCGGCATCACCGATCAGACGCTC---GGTGTCAGTGAAGGCA 1755
Query 8039 ACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTT 8098
||| |||||||||| || || || || |||||||| ||||| || || | |||||| | |
Sbjct 1754 ACGAACGATGGGGTTGTGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCT 1695
Query 8099 TGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||| || |||||||| || || || || ||||| ||||||||
Sbjct 1694 CTGAAGATACCCACGCACGAGTAGGTGGTACCCAAATCGATACCGAT 1648
>seq726
Length=46228
Score = 113 bits (124), Expect = 6e-20
Identities = 223/327 (68%), Gaps = 5/327 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || ||||| | || || || ||
Sbjct 9900 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGAAAGAACCTCGAAAGCGCCA 9959
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | || ||||| || || || ||||| || || | || | |
Sbjct 9960 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCAAGATCGTA---GACAATG 10016
Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| | || || | | | ||||||| |||||||| |||| || || || ||||| ||
Sbjct 10017 ATC-TGGCGCTCACCATCGGTCTTATCAAGACCGTAGGCGAGGGCGGCGGCGGTTGGCTC 10075
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | ||| || || ||| || || ||||| | | || || || || || ||||
Sbjct 10076 GTTGACAATGCGGAGGACGTTAAGTCCGGCAATGATACCAGCGTCCTTGGTGGCCTGTCT 10135
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| ||||| |||||||| ||||| || ||||| |||| || || |||||||||||
Sbjct 10136 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTAACCTTCTTACCGAG 10195
Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782
|| || || |||| || ||||| ||
Sbjct 10196 GTAAGACTCAGCGACCTCCTTCATCTT 10222
>seq1849
Length=11387
Score = 96.9 bits (106), Expect = 4e-15
Identities = 199/291 (68%), Gaps = 14/291 (5%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||||||||| || || || ||| | || || || || | |||
Sbjct 3968 ATCGAAATCCTCACCACCCAAGTGAGTGTCACCGTTGGTGGACTTAACCTCGAAAACACC 3909
Query 7516 TCCTTCAATGTTTA-ACAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|||| | | | |||| | | ||| || || || |||||||| || | |
Sbjct 3908 --CTTCTGGATCTCGAGAACGGAGATATCGAAGGTTCCTCCACCCAGATCGTAGACAGCG 3851
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| | | | || || || ||| || |||||||| || | ||| || || || ||
Sbjct 3850 ATGATTCTGTCCTCCTC------CTTCTCCAGACCGTAAGCAAGAGCAGCGGCGGTAGGC 3797
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691
|| |||| | ||| ||| ||||||||||||||| ||| | ||||| || || ||||
Sbjct 3796 TCGTTAACGACACGGAGAACGTTCAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTT 3739
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742
| || || || ||||| ||||| || ||||| || || || |||| | |||
Sbjct 3738 GGCGCTGGGAGTCGTTGAAGTAAGCTGGGACGGTAACAACGGCGTTCTTGA 3688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635106291144760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |