Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1479 266 4e-66 seq2510 127 3e-24 >seq1479 Length=10203 Score = 266 bits (294), Expect = 4e-66 Identities = 951/1464 (65%), Gaps = 41/1464 (3%) Strand=Plus/Plus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTC-TTGAT 111604 || ||||| |||||||||| ||| ||||| | | || ||||| | ||| | Sbjct 6436 TACTTTGGCTTCAAGACCCTTGAGCGTTCATACCTTCTCCGCCTTGATGGCAACGTTGCT 6495 Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664 | ||| |||||| ||||| | ||||| || ||| | || || || || || |||||||| Sbjct 6496 G-AAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGAGGATATTGA 6554 Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCC-CGTGGTATGTTCATCCACGCAACACCAA 111723 | | ||||||||| || ||||| | || |||| ||||| | |||| Sbjct 6555 GAAGGCCATTGAGACATACAACCTCATGTCTTCCAAATAC-TTCACACACGCCTCCCCAA 6613 Query 111724 CCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACA 111783 | |||||||| |||||||||||| |||| |||| || ||| | | | | | Sbjct 6614 CACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATGA 6673 Query 111784 AGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGT 111843 |||||||| || | || || || | ||| |||| ||||||| ||||||||| Sbjct 6674 AGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAGA 6733 Query 111844 GGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAG 111903 || || |||||||| || |||||||| | || | |||| | | ||| | Sbjct 6734 CTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACCGGTGCATACATTGCCG 6793 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 |||| || || | || | ||||| |||| ||||| ||||| || ||| ||| || Sbjct 6794 GTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCCA 6853 Query 111964 GCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020 | || || |||| | ||| ||| || | |||| ||||| ||||||||| Sbjct 6854 GATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTATGTTGAGCCAT 6913 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 ||||||| ||| || | |||||| | || ||| | ||||| || | ||||| | | Sbjct 6914 GGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCC 6973 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | ||| || | |||| |||||||||||| || ||||||||||||||| | |||||| Sbjct 6974 GTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGA 7033 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTG 112199 ||| || | ||| ||||| | || || || || || || || | | || | Sbjct 7034 AGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGACGTTTAC 7092 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG-----GAAGAA-AGTCGGGCGACT 112253 ||||| ||||| || || |||||| || |||||| |||||| |||| ||| Sbjct 7093 GGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCGCAAGACC 7152 Query 112254 GCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313 | || |||| || | ||| | | |||||| ||||||| || ||||| || Sbjct 7153 ATCAAGG-CCCAGAAGC-----TTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGA 7206 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 | || | ||| | ||||| || || || |||| ||||| || || ||||| | ||| Sbjct 7207 AACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGT 7266 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 ||| || || ||||| || || || || | || | | | ||||||| Sbjct 7267 ACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAGGTT 7326 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--A 112491 || ||||||||| | ||||| | || || || | ||| || || || | ||| | | Sbjct 7327 GCCGTGTGTAACTTGGCATCCCTTGCCCTTCCAACGTACGTTGA--CATGGCCAACGGCA 7384 Query 112492 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 ||| || | | || || ||||| || || | ||| || ||||| |||| Sbjct 7385 CATACGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACCTGAACAAGA 7444 Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 |||||||| || | |||||||| ||| || | || | | ||| | | Sbjct 7445 TTATTGATGTCAACTACTACCCCGTCGAGGAGGCCAGGCGCAGCAACTTCCGTCACAGAC 7504 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG----TCGCCACGCA 112667 || ||| | |||||||||| ||||| || |||| ||||||| | |||| | Sbjct 7505 CAGTTGCTGTCGGTGTCCAGGGTCTTGCTGATG----CATTCTTGGCCCTCCGCCTGCCC 7560 Query 112668 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCC 112727 || |||||| ||| || ||| | |||| | | || |||||||| || || |||| Sbjct 7561 TTCGATTCCCCCGAGGCTAAGCACCTCAACTCCCAGATCTTTGAGACCATCTACCACGGT 7620 Query 112728 GCTCTTGAGGCGAGTTCG--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 112785 ||| |||| | | || |||||||| || | | || | || || |||| |||| Sbjct 7621 GCT-TTGA-CTGCATCCGTTGAGTTGGCCCAGATCCACGGCACGTACGAGACCTACGAGG 7678 Query 112786 GTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-T 112843 | ||||||| || |||||| | ||| || | || ||||||| || | || | | Sbjct 7679 GATCTCCAGTGTC-CAAGGGCGAGCTCCAGTACGACATGTGGG-GCGTCACTCCTACCGA 7736 Query 112844 TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 112903 | | ||||||||| | ||||||| | |||||| || | ||| | || ||| || Sbjct 7737 CCTGTGGGACTGGGACTCCCTCAAGGTCCAGATCAAGCAGCACGGTGTCCGCAACTCCCT 7796 Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963 | | | || || ||||| || || || ||| | || || | || || || ||||| Sbjct 7797 TCTCGTTGCGCCCATGCCCACTGCTTCGACCTCCCAGATTCTCGGCTTCAACGAGTGCTT 7856 Query 112964 TGAACCCTACACGACGAACATCTA 112987 || || ||||| |||||||||| Sbjct 7857 CGAGCCATACACCTCGAACATCTA 7880 >seq2510 Length=23295 Score = 127 bits (140), Expect = 3e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | |||||| | || | || || || | ||||| || || |||||| | | | Sbjct 9441 CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGG 9500 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | |||| | | ||||||| |||| || | || || || ||||| Sbjct 9501 TGGATCCAAGACAAGGATTCCA-CCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGA 9559 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||||| || || ||| | |||||| |||||||||||||| |||||||| Sbjct 9560 GGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCAT 9619 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | | || ||| |||||||||||||| ||||| || || ||||| |||||| Sbjct 9620 GGCTGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCAC 9671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620716491764080