Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1479 264 1e-65 seq2510 125 8e-24 >seq1479 Length=10203 Score = 264 bits (292), Expect = 1e-65 Identities = 1161/1810 (64%), Gaps = 43/1810 (2%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGA 105648 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 8225 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCA-GCCAGCAAAGTGCATGGAGGT 8167 Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATG 105706 || |||| ||| ||||| | |||| | || | ||| |||| | || ||| Sbjct 8166 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT--GATCGATG 8109 Query 105707 AAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACT 105763 ||| |||||| | || ||||| | |||| | || | || ||||| || Sbjct 8108 AAGGCACCACGGTCAGCGGCCATCTG---GACAATGGTGCGCTGGGAGATCTCCCAGACC 8052 Query 105764 GTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCC 105823 || ||||||| ||||||||| | ||||| | | ||| || || || || || || Sbjct 8051 GTCTTGTAGAGAGCCTTGATATCGGCCGGGATGTTGGGGATGTTCTGGATGGATCCTCCG 7992 Query 105824 GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883 || | ||| | | |||||| | | ||||| || || || | | || ||| Sbjct 7991 TCCGCAATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTTG 7932 Query 105884 ACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTC 105943 | | |||||||| ||||| || || ||| | | | ||||||||| Sbjct 7931 AGCAACCAAGGGTTGACAACTTGGAACTCACCAGCCAGGACACGGCGCGAGTAGATGTTC 7872 Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003 | ||||| || || ||||| || || || | || || | ||| || || || ||| Sbjct 7871 GAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCAGTGGGC 7812 Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063 || || || | | ||| ||| || | ||| | | |||||| | ||||||| Sbjct 7811 ATGGGCGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGGGAG 7752 Query 106064 TCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122 |||||||| | | | | || | || ||||||| || | || ||| | || | Sbjct 7751 TCCCAGTCCCACAGGTCGGTAGGAGTGACGC-CCCACATGTCGTACTGGAGCTCGCCCTT 7693 Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCT 106182 |||| ||||| ||||| | ||||| || | || ||| | ||||| ||| | Sbjct 7692 GGACACTGGAGATCCCTCGTAGGTCTCGTACGTGCCGTGGATCTGGGCCAACTCAACGGA 7633 Query 106183 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 106242 || || | |||| || ||||| |||||||| | | || | | ||| || || Sbjct 7632 TGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGTGCTTAGCCTC 7573 Query 106243 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 106302 ||||| || | |||| | ||| |||| || ||||| || ||||| | Sbjct 7572 GGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCTGGACACCGAC 7513 Query 106303 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGC---GCAGTCTCAACGGGATAAAAATT 106359 | ||| |||||||| || | || | ||| || ||| ||||| || | || Sbjct 7512 AGCAACTGGTCTGTGACGGAAGTTGC---TGCGCCTGGCCTCCTCGACGGGGTAGTAGTT 7456 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 106419 ||||| | ||| || || || ||||| || ||||| || ||||| || | Sbjct 7455 GACATCAATAATCTTGTTCAGGTTCTTAACAACAACCTGTGTGACCTCGTGAAGCTTCTG 7396 Query 106420 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 106479 | || | |||| | | | || ||| |||||||||| | |||||||| || Sbjct 7395 GAAGTCGTATGTGCCGTTGGCCATGTCAACGTACGTTGGAAGGGCAAGGGATGCCAAGTT 7336 Query 106480 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACT 106539 || || || |||||| | | | |||||| | ||| || || |||| ||| || || Sbjct 7335 ACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCACAGGTTAGAGCT 7276 Query 106540 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCAT 106599 || || || | ||||| ||||| ||||| |||||| ||||||||||| | ||| Sbjct 7275 GCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACAT 7216 Query 106600 GTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTG 106658 | | || | || ||||| ||||| |||| |||||| | | ||| | | || | | || Sbjct 7215 GAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTT 7156 Query 106659 GTACAATGGCGTT--GGCCCGTC-CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 106715 | |||| || | ||| || ||||| |||||| || |||||| || || |||| Sbjct 7155 G----ATGGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAGCCTCGAACT 7100 Query 106716 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGA 106774 | ||||| |||| | | || || || || || || || | |||| ||| | | Sbjct 7099 CATCACCGTAAACGTCCGCCAATCCAGG-GCATTCGTTGGGGCACATGAGAGTCCAGTCA 7041 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 || || |||||| ||||||||||| || || || ||||| || | | || | || Sbjct 7040 CCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCA 6981 Query 106835 C-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 | ||| || | || || | || ||||| | || || | |||||| | || ||| Sbjct 6980 CGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAAGACATC 6922 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 106949 |||||||||||||||| ||||| |||| | || | | | | ||| | || | Sbjct 6921 AGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCGCTTGTTG-CCACCCTGGT 6863 Query 106950 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 107009 || || | || ||| ||| || ||||| ||||| |||| ||||| | || | | Sbjct 6862 CAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTC 6803 Query 107010 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 107069 | || || || ||| | |||| | | | |||||||| || || |||| Sbjct 6802 CGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCCGATAC 6743 Query 107070 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 107129 | || || ||||||||| ||||| | | || || |||||||||| | || Sbjct 6742 CTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCAATAC 6683 Query 107130 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCA 107188 |||||||| || ||| | |||||| |||| ||| || || ||||||||||||| Sbjct 6682 TATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGTACCAGCA 6624 Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTATGTCT 107246 |||||||| ||||| | ||||| |||| || |||| ||||| || |||||||| Sbjct 6623 TTGAAGAGTGTTGGGGAGGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATGTCT 6566 Query 107247 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATT 107306 | | | | ||||| || || ||||| ||||| | ||||||||||||| ||||| | Sbjct 6565 CAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATCATGTGCT 6506 Query 107307 GGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGA 107366 | || |||| | | ||||||| || || |||| || ||||||||| |||| Sbjct 6505 GTGGCCTTTCAGCAACGTTGCCATCAAGGCGGAGAAGGTATGAACGCTCAAGGGTCTTGA 6446 Query 107367 GACCAAAGTA 107376 |||||||| Sbjct 6445 AGCCAAAGTA 6436 >seq2510 Length=23295 Score = 125 bits (138), Expect = 8e-24 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||||||||||||||| ||||| || || || || ||||| ||||| | ||||||||| Sbjct 9671 GTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCAGCCATGAGACC 9612 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| |||||| | ||| || |||||||||||||||||||| || Sbjct 9611 ACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGC 9552 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| ||||||| ||| |||| | || | |||| | | ||| | | | Sbjct 9551 AGCGAAGGCAACCAGGCGCTGGGCAAAGGTG-GAATCCTTGTCTTGGATCCACCTGACAG 9493 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 |||| | |||||||||| || || || | || | |||||| Sbjct 9492 CCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGC 9450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589956175676360