Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1537 154 3e-32
seq1071 145 2e-29
>seq1537
Length=49637
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| || | ||||||||||||||| || || || ||||| || | ||| || |
Sbjct 26398 AGTCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 26457
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| ||||||||||| || |||||||| || || || ||||| || ||||| || ||
Sbjct 26458 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCC 26517
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| || || || |||||| || || || ||||| || ||||| ||||||||
Sbjct 26518 TTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTG 26577
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || |||| || || ||||| | ||||||
Sbjct 26578 ATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 26615
>seq1071
Length=16463
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||| || | |||||||| || || || |||||||| | | ||| | ||||| ||
Sbjct 1083 AACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCATCCTC 1142
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || ||||| || || || || ||||| || || ||||| || || |||||
Sbjct 1143 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTG 1202
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || ||||||||| || ||||| ||||| || ||||| || |||| |||||
Sbjct 1203 AATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTT 1262
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || | ||| || ||||| | ||||||
Sbjct 1263 TCCGGTGAGAGTCTTGACGAAGATTTGCAT 1292
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||||||| ||| || || || ||||| ||| || || |||||||| ||||||||
Sbjct 861 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTG 920
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || ||||| || || || || || || || ||||| ||
Sbjct 921 CTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTT 980
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
| ||| ||||| ||||||||||| ||| || || || || |||| |||||||| ||
Sbjct 981 TGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGT 1040
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || || || | |||||
Sbjct 1041 CAAGGTCTTGACAAAAATCTGCAT 1064
Score = 136 bits (150), Expect = 9e-27
Identities = 160/214 (75%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCAT 194986
|| ||| | ||| ||||| ||||| || ||||| |||||||||| |||| || | ||||
Sbjct 1308 CAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAG-GTGCGGCCAT 1366
Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046
| || ||||||||||| || ||||| || || || ||||| || || || || || || |
Sbjct 1367 CCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTAT 1426
Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106
| || || || ||| ||||| |||||||| || || |||||| ||||| || | ||
Sbjct 1427 CCTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCG 1486
Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| || || | ||| || ||||| | |||||
Sbjct 1487 TCTTCCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520
Score = 107 bits (118), Expect = 4e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| || ||||| ||||| ||| ||||| | ||||| || | |||
Sbjct 1545 GTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAACTG 1604
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || ||||| || | || || ||||| ||||||||||| || ||||| ||||| ||
Sbjct 1605 CTTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 1664
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || || || ||||| || || || || | || | ||||| || ||
Sbjct 1665 CGACTTCACATTGTCGATAGTGTCAGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGT 1724
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 1725 CAGGGTCTTGACGAAAATCTGCAT 1748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109434135337013
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |