Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 102 6e-17
>seq1071
Length=16463
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || || || || || || || ||||| ||| | ||| | |||| |||
Sbjct 1540 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCATCCTCC 1599
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
|| ||||| || || || ||||| ||||| || || || |||||||| || || || |||
Sbjct 1600 AACTGCTTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 1659
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | ||||||||||| || || || | ||||| || |||
Sbjct 1660 ATCTTCGACTTCACATTGTCGATAGTGTCAGACGACTCAACCTCCAAAGTGATGGTCTTG 1719
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || || || ||||||||
Sbjct 1720 CCAGTCAGGGTCTTGACGAAAATCTGCAT 1748
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| | ||| | || || || || || || |||||||| | | ||| | | |||| ||
Sbjct 1083 AACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCATCCTC 1142
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || || || |||| ||||| || || || || ||||| || ||||||||
Sbjct 1143 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTG 1202
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||| || || || | || | || || |||| || ||||| || || | || ||
Sbjct 1203 AATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTT 1262
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| | ||| || || || || |||||
Sbjct 1263 TCCGGTGAGAGTCTTGACGAAGATTTGCAT 1292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396262273822023
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |