Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 102 6e-17
seq1537 96.9 3e-15
>seq1071
Length=16463
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || || ||| || ||||| ||||| || ||| | ||| | || |||
Sbjct 1540 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCATCCTCC 1599
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
|||||||| || || || |||| ||||| || |||| |||| |||||||||||| |
Sbjct 1600 AACTGCTTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 1659
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | || || |||| ||| ||||||| || || || ||
Sbjct 1660 ATCTTCGACTTCACATTGTCGATAGTGTCAGACGACTCAACCTCCAAAGTGATGGTCTTG 1719
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| || || || |||||||||||
Sbjct 1720 CCAGTCAGGGTCTTGACGAAAATCTGCAT 1748
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || || |||||||| || || || ||||| || || | |
Sbjct 847 AGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTC 906
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||| ||||| || ||||| ||||| || |||| || | ||||||
Sbjct 907 CCATCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCC 966
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || ||||||| || || | | | ||||| | ||| ||||| | |||
Sbjct 967 TTATCCTGAATCTTTGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTA 1026
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| || || ||||||||||||||
Sbjct 1027 ATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1064
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||||| ||| ||| || || || ||||||||||| | | | || | || || | |||
Sbjct 1089 ATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCATCCTCGAGCTG 1148
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||| || || || ||||| ||||| || |||| || | ||||||||| || ||||||
Sbjct 1149 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATCTT 1208
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
|| || | | | | || |||| ||| || |||| |||||| || ||||| ||
Sbjct 1209 GGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGT 1268
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
| ||| || || || || |||||
Sbjct 1269 GAGAGTCTTGACGAAGATTTGCAT 1292
>seq1537
Length=49637
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| ||||| || || ||| ||| || || || ||||| || || || | || | ||
Sbjct 26403 CAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATC 26462
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| | |||||| ||||| || ||||| ||||| || |||| ||||| |||||||||||
Sbjct 26463 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 26522
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| || ||| | | || || |||| ||||||||| | || || ||
Sbjct 26523 CTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGT 26582
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||||| || || || || || |||||
Sbjct 26583 CTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 26615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380922098101497
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |