Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1479 235 1e-56 seq2510 230 4e-55 >seq1479 Length=10203 Score = 235 bits (260), Expect = 1e-56 Identities = 836/1282 (65%), Gaps = 71/1282 (6%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| ||| ||||||||||||||||||||||| |||||| ||| |||||||| Sbjct 7628 GTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGTGCTTAGCCTCGGGG 7569 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 ||| |||||||| || || | || | || || || ||||| || |||| | | Sbjct 7568 GAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCTGGACACCGACAGCA 7509 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCG--CTTCTGGCACGGGATAAAAGTTGACGT 221594 | || ||||| | |||| ||| | | || || | ||||| || ||||||| | Sbjct 7508 ACTGGTCTGTGACGGAAGTTGCT-GCGCCTGGCCTCCTCG-ACGGGGTAGTAGTTGACAT 7451 Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654 | || | ||||| |||||| | | || | |||||| ||||||||| Sbjct 7450 CAATAATCTTGTTCAGGTTCTTAACAACAACCTGTGTGACCTCGTGAAGCTTCTGG---- 7395 Query 221655 TGAACACCAACTCGCC---GCCGTCGTGGAGGGGTTCCACAAAAGCGTTT--AGGGCAAC 221709 || ||| ||||| | | | || || | |||| ||||||| Sbjct 7394 --------AAGTCGTATGTGCCGTTGGCCATG---TCAACGTA--CGTTGGAAGGGCAAG 7348 Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTA 221767 | |||| |||||||||||| ||||| || || | | |||| | ||||| || Sbjct 7347 GGATGCCAAGTTACACACGGCAACCTCATC--TGGAGCAGAGTACTCGACAATCTCCGTG 7290 Query 221768 CAGAGGTT---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824 || ||||| ||||| |||||| || |||| || || || |||||| ||| | Sbjct 7289 CACAGGTTAGAGCTGCG---GATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 7233 Query 221825 GCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCC 221884 || |||||||| | ||| || || || ||||| ||||| | | ||||| || | Sbjct 7232 GCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTAC 7173 Query 221885 CAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCG--- 221941 || || | ||||| || | ||||| ||||| |||| || || || Sbjct 7172 CAAAGCT-TCTGGGCCTTGATGG--TCTTGCG---ACCCT---TCTTCTCCGACTCGTAT 7122 Query 221942 -----GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG 221996 ||| ||||| | | |||| |||||||| | || ||| || || || | Sbjct 7121 TTCTCGTAGAGAGCCT--CGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGT 7064 Query 221997 CGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056 ||| ||||| ||| |||||| ||| | | || | || ||||||||| ||||||| Sbjct 7063 TGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGA 7004 Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCA 222116 |||| || || | || | || | || || |||||| ||||| ||| ||||||| Sbjct 7003 TCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCA 6944 Query 222117 GATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGG 222176 ||||| ||||| || | ||||||||||| ||||| | ||||| ||| | || || | Sbjct 6943 AGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAG 6884 Query 222177 GTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTC 222235 | ||||||||||||||||| || || || ||| | |||||||| ||| || | Sbjct 6883 GGCGCTTGTTGCCACCCTGGTCAACGTATCT-GGCAGTGTTGTTGAAGACGCGGAGCATG 6825 Query 222236 GGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGG 222295 || || | ||||| || |||||||| || |||||| |||||| ||| | || Sbjct 6824 GGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCAC---GG 6768 Query 222296 TTAC--TGGCAG-ACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTT 222351 ||| ||| | || |||||||| ||||| || ||| ||||||||||| || |||| Sbjct 6767 ATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTT-GAGATCATGGCACATGTCTT 6709 Query 222352 GAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGA 222411 ||| ||||| ||| ||||| ||| |||||||| | || | || || || || || Sbjct 6708 GAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGA 6649 Query 222412 CATCTGAG-ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGC 222470 || ||| | | ||||| | || || || || || || || ||||||||| ||||| Sbjct 6648 CAGCTGGGCCTGTGGTGTACCA-GCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATT 6590 Query 222471 CCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCA 222530 |||||| || | ||| ||||| | | | | | || | || |||||||| | Sbjct 6589 TGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAA 6530 Query 222531 TGGCGCATCTCATGTACATGTACTGGGGCCTCTC--CACAGGACCCTTGGAGCTGGAGAG 222588 || | ||| ||||| ||| ||||| || || | || | || ||||| Sbjct 6529 CCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAGGCGGAGA- 6471 Query 222589 CAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTG 222648 ||||| || || || |||||||| |||||||| | | || || || | | ||| Sbjct 6470 -AGGTATGAACGCTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTA 6412 Query 222649 AACCACGGCGGCGTCCAGCTCC 222670 || ||||| | || |||||| Sbjct 6411 AAGGACGGCAGAGTTAAGCTCC 6390 >seq2510 Length=23295 Score = 230 bits (254), Expect = 4e-55 Identities = 565/855 (66%), Gaps = 18/855 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| || || |||||| || || |||||||| || Sbjct 9129 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 9188 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| | ||| | Sbjct 9189 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCTCC 9248 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || ||||| || || || |||||||| || |||| | Sbjct 9249 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 9308 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| ||| || || || | |||||| || |||||||||||||| || ||| Sbjct 9309 TTCAGCAGCGAGGTTCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 9368 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||| | ||| || || || || || || ||||| | || Sbjct 9369 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATCGACACATACATCAAGGAGCAG 9425 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 ||| || | | || || || |||||||||| ||| || ||||||||| |||||| Sbjct 9426 GCCCAGCGCACATAC-CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGC 9484 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | | ||||||| | | || | || |||| | |||| ||||| || Sbjct 9485 CGACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGC 9544 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||| ||||| || ||||| ||||| ||| ||| ||||| || | || ||||||||||| Sbjct 9545 CTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAA 9604 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGG 26008 | || || |||| | || || ||||| ||||||||||||||| | | || |||| Sbjct 9605 GAAGCGTGGTCTCATGGCTGGCCT-CACTTTCTCCAACGAGCTCATCTCCCGCGATGAGG 9663 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 ||||||||| || || |||||||| |||| | || ||| | ||| || | Sbjct 9664 GTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCG---CACCTTAGACAC-CGCCCAAGC 9719 Query 26069 AAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 ||| || | ||| | | |||||| |||||||| | ||||||| | ||||| Sbjct 9720 AAGCAGGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACA 9779 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187 | ||||||||| || | |||| |||||||||||| Sbjct 9780 GAGGCACTCCCATGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAG 9839 Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAAC 26247 | || |||||| |||||| || || || | |||||| | | ||| Sbjct 9840 TTCGTCGCCGACAGGCTGCTGCTTTCTCTCGGTAACGAGAAGTTCTACAAGTCTACCAAC 9899 Query 26248 CCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGG 26307 || |||||||| ||||| ||||| || ||| ||| ||||||||||||||||| ||| | Sbjct 9900 CCCTTCGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGT 9959 Query 26308 GTCGGCGACTATCAA 26322 |||| |||||| ||| Sbjct 9960 GTCGCCGACTACCAA 9974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928806032340160