Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1071 87.8 1e-11 >seq1071 Length=16463 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| |||||||| | ||| || || | || ||||||| | ||| Sbjct 1071 ACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGT 1130 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || ||||| || || ||||| || || || || || || || || || Sbjct 1131 ACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCC 1190 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| ||||||||||| ||||| || || ||||| | | | | ||| | Sbjct 1191 CTCCTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGA-CTTCCA 1249 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| || || |||||||||||||| ||||| ||||| Sbjct 1250 GCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTG 1289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268035974089172