Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1479 271 9e-68 seq2510 125 9e-24 >seq1479 Length=10203 Score = 271 bits (300), Expect = 9e-68 Identities = 1165/1813 (64%), Gaps = 49/1813 (3%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| |||| ||||||||| || |||| || || ||||||| | | Sbjct 6436 TACTTTGGCTTCAAGACCCTTGAGCGTTCATACCTTCTCCGCCTTGATGGCAACGTTGCT 6495 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| |||||| ||||| | ||||| || || | ||||| ||||| || || ||||| Sbjct 6496 GAAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGAGGATATTGAG 6555 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAA 75323 | | | ||||||||| || ||||| |||| || |||| ||||| | |||| Sbjct 6556 AAGGCCATTGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCCTCCCCAA 6613 Query 75324 CCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 | ||||||||||||||||||||| || || ||| |||| |||||| | ||| || Sbjct 6614 CACTCTTCAATGCTGGTACACCACAGGCC-CAGCTGTCATCCTGCTTCTTGGTCGACATG 6672 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 |||||||| || | |||||||||| || || | | ||||| ||||||||| Sbjct 6673 AAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAG 6732 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 || || ||||| || || |||||||| | | | |||| | ||| Sbjct 6733 ACTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACCGGTGCATACATTGCC 6792 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || || || | || | ||||| |||| ||||| ||||| || ||| ||| || Sbjct 6793 GGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCC 6852 Query 75563 CGCTATGTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 | || || | | || | ||| ||| || || |||| |||| | || || Sbjct 6853 AGATACGTTGA-CCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTATGTTGAGCC 6911 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 |||||| || ||| || | |||||| | || || | ||||| || | || || | Sbjct 6912 ATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAG- 6970 Query 75679 TCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || ||| | || | || | | || ||||| || || || ||||||||||| |||| Sbjct 6971 TCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTG 7030 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCG 75796 || || ||| | ||| |||| | || || || || || || || | | |||| Sbjct 7031 AGAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGACGTT 7089 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTAC-ACAA-----AGTATGAAGAGGAGGGTAGAGCC 75850 ||||| ||||| || || |||||| | || ||| || || ||||| | | Sbjct 7090 TACGGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCG---C 7146 Query 75851 AATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 || ||| | | || | | || | ||||| | | |||||| | || ||||| ||||| Sbjct 7147 AA---GACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGAC 7202 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 |||| || | ||| | |||||||||||||| ||| ||||| ||||| ||||| | Sbjct 7203 AGGAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCT 7262 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 || || ||| ||||| || || |||||||| ||| | |||||| | | | ||||| Sbjct 7263 CGGTACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGA 7322 Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCG 76089 | || || || || |||||||| | |||||||||| ||| || | | | | Sbjct 7323 GGTTGCCGTGTGTAACTTGGCATCCCTTGCCCTTCCAACGTACGTTGACATGGCCAACGG 7382 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 ||| | || | | || ||||| || ||||| || ||||| || || || ||| Sbjct 7383 CACATACGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACCTGAACAA 7442 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGC---GCGAAAGTCTAATATGCGACA 76206 | ||||| || | || ||||| ||| || ||| | || | || || Sbjct 7443 GATTATTGATGTCAACTACTACCCCGTCGAGGAGGCCAGGCGCA---GCAACTTCCGTCA 7499 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGC 76266 |||||| ||| | | ||||| || ||||| || |||| ||| | |||| | Sbjct 7500 CAGACCAGTTGCTGTCGGTGTCCAGGGTCTTGCTGATGCATTCTTGGCCCTCCGCCTGCC 7559 Query 76267 ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326 || ||||| || || ||| | | || | | |||||||| ||||| || |||| Sbjct 7560 CTTCGATTCCCCCGAGGCTAAGCACCTCAACTCCCAGATCTTTGAGACCATCTACCACGG 7619 Query 76327 ATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386 | || || ||| ||||| | ||| || | || ||||| | ||||| Sbjct 7620 TGCTTTGACTGCATCCGTTGAGTTGGCCCAGATCCACGGCACGTACGAGACCTACGAGGG 7679 Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCA 76445 ||||| | |||| | || | ||| |||| || ||||||| || | || | | | Sbjct 7680 ATCTCCAGTGTCCAAGGGCGAGCTCCAGTACGACATGTGGG-GCGTCACTCCTACCGACC 7738 Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | |||||||| ||||||| | |||||| || | ||| | || ||| ||| Sbjct 7739 TGTGGGACTGGGACTCCCTCAAGGTCCAGATCAAGCAGCACGGTGTCCGCAACTCCCTTC 7798 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | | || || ||||| || || || ||| | || || | || || || ||||| | Sbjct 7799 TCGTTGCGCCCATGCCCACTGCTTCGACCTCCCAGATTCTCGGCTTCAACGAGTGCTTCG 7858 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | |||||||| | ||||||||| | | | ||| || |||||||| |||||| Sbjct 7859 AGCCATACACCTCGAACATCTACTCGCGCCGTGTCCTGGCTGGTGAGTTCCAAGTTGTCA 7918 Query 76626 ACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685 || | |||| ||| | | || || || ||||| | | |||||| | | Sbjct 7919 ACCCTTGGTTGCTCAAAGACTTGGTCGACATGGGACTGTGGTCTGACAACATGAAGAACC 7978 Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745 ||| | | || || ||||| || || ||| | | ||||| | ||||||||| Sbjct 7979 GCATCATTGCGGACGGAGGATCCATCCAGAACATCCCCAACATCCCGGCCGATATCAAGG 8038 Query 76746 ATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAG 76802 ||||||| || || ||||| || | || | |||| | |||||||| | Sbjct 8039 CTCTCTACAAGACGGTCTGGGAGATCTCCCAGCGCACCATTGTC---CAGATGGCCGCTG 8095 Query 76803 ATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAAC 76860 | |||||| |||||| |||| |||| ||| | || | |||| | ||||| Sbjct 8096 ACCGTGGTGCCTTCATCGATC--AGTCCCAGTCCCTCAACATCCACATGAAGGACCCAAC 8153 Query 76861 GATGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAA 76919 ||| |||| || | || ||||| | || || ||||| | || ||||| ||||| | Sbjct 8154 AATGGGCAAGATCACCTCCATGCACTTTGCTGGC-TGGAAGCTCGGCCTCAAGACCGGCA 8212 Query 76920 TGTACTATCTCCG 76932 ||||||| ||||| Sbjct 8213 TGTACTACCTCCG 8225 >seq2510 Length=23295 Score = 125 bits (138), Expect = 9e-24 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | || | || || || |||||||||| | ||||| | | ||| | | Sbjct 9450 GCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGGTGGATCCAA 9509 Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114 |||| | || | |||| ||| ||||||| |||| || || || ||||||||||| Sbjct 9510 GACAAGGATTC-CACCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGAGGGTATCTT 9568 Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 ||||||||| || ||| | |||||| ||| | |||||||| ||||||||| | ||||| Sbjct 9569 CTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCT 9628 Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||||| || || || || ||||| ||||||||||||||| Sbjct 9629 CACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCAC 9671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596544700676320