Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 143 8e-29
seq1441 116 1e-20
seq1480 87.8 5e-12
>seq1479
Length=10203
Score = 143 bits (158), Expect = 8e-29
Identities = 578/903 (64%), Gaps = 13/903 (1%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || |||||||| |||||||||||| || |||||| || | |||||||||||
Sbjct 7308 GTACTCGACAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTT 7249
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| | ||| |||||||||||||| | ||| | ||| |||||||||| |||| |
Sbjct 7248 GCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGA 7189
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCT-TCCG 155808
|| ||||| ||| || | |||| || || |||| | || | | ||||
Sbjct 7188 CTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTG-CGACCCTTCTTCTCCG 7130
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868
|||| |||||| || || | | | || ||||||||| || || ||||||||
Sbjct 7129 ACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGC 7070
Query 155869 ACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATA 155925
| | | |||||| | || | ||| | || || | ||||||| ||| || |
Sbjct 7069 ATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTC---AACACGCTTCATGAAGA 7013
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGA 155984
||| ||| | ||| ||||| | ||| | | | ||| ||||| | ||||||
Sbjct 7012 GATCCGGGATCCAGAGAGCGTAGAACAAGTCAC-GGGCACGGACTTCCTCCTTGCCGTGG 6954
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||||| | || ||||| || | ||||| || |||||| | ||| || ||
Sbjct 6953 TTCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCG 6894
Query 156045 AAACTACCA---TTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
|| |||| | | ||||||||||| || || || | ||||| || ||||||||
Sbjct 6893 AAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACG 6834
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| ||||| |||| ||||| || || | || ||||| ||| ||| | | ||| |
Sbjct 6833 CGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTG 6774
Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCAT 156221
| || | | ||| || | | ||| ||||| || | || || || || |||
Sbjct 6773 GCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACAT 6714
Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCAC 156281
||| | || | | ||||| |||||| ||| || | ||| | | ||||
Sbjct 6713 GTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAG 6654
Query 156282 GAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAA 156341
|| | || | ||||||| ||||| ||||| ||||| || | || || | ||
Sbjct 6653 GATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAG 6594
Query 156342 TACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATA 156401
|| || |||||| | ||||||||| | |||||||| || ||||||||
Sbjct 6593 TATTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATG 6534
Query 156402 CAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGC 156461
| | | || | ||| ||| ||||| || | || ||| ||||||| ||
Sbjct 6533 CCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAGGCGG 6474
Query 156462 AGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTG 156521
|||||||||| || || || || || || || || || | | |||||||||| |
Sbjct 6473 AGAAGGTATGAACGCTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCG 6414
Query 156522 TAA 156524
|||
Sbjct 6413 TAA 6411
>seq1441
Length=55341
Score = 116 bits (128), Expect = 1e-20
Identities = 198/286 (69%), Gaps = 6/286 (2%)
Strand=Plus/Minus
Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643
|||| | |||||||||||| ||||||||| | || || ||||| |||||||| |||
Sbjct 7290 TTGACGAGACGACGCTGAATGTAACCAGTTTCGGCAGTCTTGACAGCAGTATCAATAAGA 7231
Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT---AGCCCCCCAATA 302700
|| |||||||| ||||||| ||||| || | ||||| | || ||||| | |
Sbjct 7230 CCCTCACGACCAGCCATAGCGTGGAAAAAGA---ATTCCGATGGTGTAAGCCCTCTCAGG 7174
Query 302701 AAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGC 302760
| ||| | ||||| || ||||| | |||||| || | || ||| || || || |||
Sbjct 7173 TACGAGTTTTCAACAAAGCCACGAGACTCGGGAGAGTAATCATCCTTTGTGAAATGCGGC 7114
Query 302761 AGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGG 302820
||||| | || || | ||| | || |||||||| || || || ||| || || |
Sbjct 7113 AGGGTGCGGTACTTGAACCCGAAGGGAATACGCTTACCCTCCACAGACTGTTGCCCGACA 7054
Query 302821 CACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866
|| | ||||||| || ||||| | | |||||||| ||||
Sbjct 7053 AGCGCAGTCATCTGGGAGATATTGATAGTGGAACCCTTGGATCCAG 7008
Score = 98.7 bits (108), Expect = 3e-15
Identities = 106/140 (76%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| |||| ||||| ||| |||| |||||||||
Sbjct 8082 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTT---CTTTGACGACACACCAGCA 8026
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||||||||| || || | || || | |||||||||||| || || ||||
Sbjct 8025 AAATGGAAAGTATTGAGCGTCATCTGCGTGGCAGGCTCACCAATAGACTGGGCGGCAAGA 7966
Query 301933 ATACCAACCATTTCTCCTGG 301952
||||||||||| || || ||
Sbjct 7965 ATACCAACCATCTCACCAGG 7946
>seq1480
Length=20701
Score = 87.8 bits (96), Expect = 5e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || ||||||||| ||||| || ||||| |||||||||| ||| || |
Sbjct 6731 TGAGCAATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAATA 6672
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || |||||| |||||||| | || | || || | ||||| ||||| |||||
Sbjct 6671 CCCTCGCGAGTGAAAGGCATATCTTCTTGG-CGGTAGGTGATACCAATGGTTCCTTTTTG 6613
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||| |||||| |||||| ||||||||
Sbjct 6612 TCCGTGGCGAGAAGCGAACTTGTCACCAAT 6583
Score = 84.2 bits (92), Expect = 6e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
||| ||||| ||||||||||||||||| ||||| || |||||||| || |||||||| |
Sbjct 7086 TGCGCCGTGGGAAATCATACAATCACGTTCCATCTCTCCGAAACGCAGTCCACCATCTCT 7027
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
|| | |||||| | || || | || ||| | | || || ||| | | ||
Sbjct 7026 CGCACGACCCTCCACTGGTTGCCTCGTCAGAATTTGAGTTGGTCCTCTGGCTCTGGCGTG 6967
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
||| || | |||||||| | ||||||||||| ||| |||||| | |||
Sbjct 6966 GATCTTGTCGTCGACCATATGTCTCAGACGCTGGTAATATGTGGGACCCAAGAA 6913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471754634263243
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |