Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1479 123 2e-23 seq1071 113 4e-20 >seq1479 Length=10203 Score = 123 bits (136), Expect = 2e-23 Identities = 1047/1676 (62%), Gaps = 60/1676 (4%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417 |||||||| || |||||||| ||| | |||| ||| || | | || || || Sbjct 8063 ATCTCCCAGACCGTCTTGTAGAGAGCCTTGATATCGGCCGGGATGTTGGGGATGTTCTGG 8004 Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTG 138477 ||| || | ||||||||||||| || |||||| || |||| || | | Sbjct 8003 ATGGATCCTCCGTCCGCAATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCG 7944 Query 138478 ATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGA 138537 | |||||| || | || | ||| | || || || ||||| |||| || || || Sbjct 7943 ACCAAGTCTTTGAGCAACCAAGGGTTGACAACTTGGAACTCACCAGCCAGGACACGGCGC 7884 Query 138538 ACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTG 138597 ||| ||||| |||| | ||||| || | |||||| || |||||||| | || Sbjct 7883 GAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTC 7824 Query 138598 GTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGT 138657 | || || |||||| ||| || | ||| || || || | |||||| ||||||| | Sbjct 7823 GAAGCAGTGGGCATGGGCGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGG 7764 Query 138658 TCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGT 138717 ||||||| || ||||||||||| ||| |||| | | |||||| |||||||| Sbjct 7763 ACCTTGAGGGAGTCCCAGTCCCACAGGTCGGTAGGAGTGACGCCCCACATGTCGTACTGG 7704 Query 138718 AACATTCCCAAACTTG----CGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTG 138773 | | || | |||| | ||| || ||||| | ||||| || || Sbjct 7703 AGC--TCGC--CCTTGGACACTGGAGATCCCTCGTAGGTCTCGTACGTGCCGTGGATCTG 7648 Query 138774 CGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATT 138833 |||||||| | || | ||||| | ||| || || || ||||| || Sbjct 7647 GGCCAACTCAACGGATGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTT 7588 Query 138834 GAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAG 138893 ||| ||||||| | ||| | |||| |||||| | ||| || || || || Sbjct 7587 GAGGTGCTTAGCCTCGGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAG 7528 Query 138894 CCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGC-TTTTGCGGCTTCGA 138952 || || || || || | || || | || || | | ||| || | || | |||| Sbjct 7527 ACCCTGGACACCGACAGCAACTGGTCTGTGACGGA-AGTTGCTGCGCCTGGCCTCCTCGA 7469 Query 138953 TAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTAT 139012 || || ||||| ||||| || || ||||| | || || || |||| || | Sbjct 7468 CGGGGTAGTAGTTGACATCAATAATCTTGTTCAGGTTCTTAACAACAACCTGTGT-GACC 7410 Query 139013 GCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTG 139071 | | || | | | || ||||||||| |||||| | | | |||| || | Sbjct 7409 TCGTGAAGCTTCTGGAAGTCGTATGTG---CCGTTGGCCATGTCAACGT--AC------G 7361 Query 139072 TTG--ACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGA 139129 ||| | || || || | ||| ||||| || || || || || | ||| |||| Sbjct 7360 TTGGAAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGA 7301 Query 139130 CAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTC 139189 |||| || | |||| ||| | ||| ||||| | || | || ||||| || | Sbjct 7300 CAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGC 7241 Query 139190 GGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAA 139249 |||| |||||||| ||||| | ||| | || | || || || || | ||| | || Sbjct 7240 GGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAA 7181 Query 139250 TGAATTTGAACAAGTCCCTAGCTT---GTATTTGACGCACGT---AAAGTTCGTCGC--G 139301 || | | | ||| ||||| | |||| | | | | ||| || | Sbjct 7180 TGGAGT--ACCAA------AGCTTCTGGGCCTTGATGGTCTTGCGACCCTTCTTCTCCGA 7129 Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 |||||| || |||||||| | ||||| |||||||| |||| | | | | || Sbjct 7128 CTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCA 7069 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 | || || |||||||| | ||| | |||||| || || ||| ||||||| ||||| Sbjct 7068 TTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATC 7009 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481 ||| ||||| | |||| | | ||| || || || || ||| || ||| Sbjct 7008 CGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTT 6949 Query 139482 TTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGC 139541 ||| || | ||| || || || |||||||||||||| || | ||||||||| | || Sbjct 6948 CCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGC 6889 Query 139542 GCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAA 139598 || || |||||||| || || |||| || ||| || ||||| ||||| | Sbjct 6888 ACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAG 6829 Query 139599 CATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAG 139654 ||| || | | |||| ||| |||||||||| || | | || | || | || | Sbjct 6828 CATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTAT-GCACCGGTG---G 6773 Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-A 139713 | |||| ||| | || | ||||| || ||| || || || || | | || Sbjct 6772 CACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATG 6713 Query 139714 TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCAT 139773 || | | ||| || || ||||| || || || |||| ||| ||||| ||||| Sbjct 6712 TCTTG-AGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAG 6654 Query 139774 GACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA- 139832 || || || || | || || || || || || || || ||||| ||||| Sbjct 6653 GATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAG 6594 Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892 ||||| ||||| | | ||| || || ||||| || |||||||| ||||| || Sbjct 6593 TATTTG-GAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAAT 6535 Query 139893 ACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttt 139952 || || | || ||||| | ||| || || || ||| || || ||| || | Sbjct 6534 GCCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAGGCG 6475 Query 139953 tttCAG--ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || || | || ||| ||||||||| |||||||||| ||||||||||| Sbjct 6474 GAGAAGGTATGAACG--CTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATC 6421 >seq1071 Length=16463 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || || ||||| || || ||| | || Sbjct 1520 ATGCAGATTTTCGTCAAGACTCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1461 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| || || || || || || || || || Sbjct 1460 GATACCATTGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAG 1401 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || |||||||||||| | | | |||| ||||| ||| Sbjct 1400 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAAC 1341 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || || |||||||| |||| |||| || || Sbjct 1340 ATTCAGAAGGAGTCTACTCTGCACTTGGTTCTGCGTCTGCGTGGTGG 1294 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| || ||||| || || || || |||||| ||||||| ||||| || Sbjct 1892 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 1833 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || ||||| | | | | || || || ||||| || ||||| || || || ||| Sbjct 1832 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 1773 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| | || |||| || || Sbjct 1772 TTGGTCCTCCGTCTGCGTGGTGG 1750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449878822398920