Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2510 152 8e-31
seq1993 113 7e-19
seq455 93.3 7e-13
seq1479 91.5 2e-12
>seq2510
Length=23295
Score = 152 bits (168), Expect = 8e-31
Identities = 234/329 (71%), Gaps = 5/329 (2%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| || ||||| ||| | |||||| || |||||| | |||||| || |||||
Sbjct 9665 ACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCAGCCATGAGACCACGCTT 9606
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| || || | ||| ||| ||||| ||||| ||||| ||||| || ||
Sbjct 9605 CTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAA 9546
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| | || || |||| |||||| ||| | || | | | | ||||||| | | |||||
Sbjct 9545 GGCAACCAGGCGCTGGGCAAAGGTGG--AATCCTTGTCT-TGGATCCACCTGACAGCCCA 9489
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTCCTTCT 794578
|| ||||| ||| | | | || | || |||||||| ||||||| || | ||
Sbjct 9488 GTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGAGGTATGTGCG-CT 9430
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
| || | ||||||| ||| |||||||||||||| ||||| ||||| | ||| ||||| |
Sbjct 9429 GGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCT 9370
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667
|||| ||| ||||| || || ||||||
Sbjct 9369 CGATCATGATTTGGAAACCGTAGAAGCAG 9341
Score = 125 bits (138), Expect = 1e-22
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||| | || ||| ||| || ||||||||||| || | || ||||| ||||||
Sbjct 9970 TAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 9911
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
| ||| ||||||| | | |||| ||||||| ||||| || ||||| | |
Sbjct 9910 AAGTCGAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTACCGAGAGAAAGCAGCAGCCTG 9851
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CAC 794086
||||||||||| |||||||| || ||| | | |||||||||||||| ||||| ||
Sbjct 9850 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAT 9791
Query 794087 GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139
||| || | ||| | | ||||||| ||||||| |||| |||||| ||||||
Sbjct 9790 GGG-AGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGACAGCCTCGGTGATGA 9739
>seq1993
Length=14110
Score = 113 bits (124), Expect = 7e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
||||||||||| | || || ||| | ||||| ||| |||||||||| ||||||||||
Sbjct 1979 AGGTCGACCAAGAGATGCTGTTCGAGATCATCCTGGCCTCCAACTACCTGGACATCAAGC 2038
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
| || |||||| | || |||||||| ||||| || | || ||||| ||| |||||||
Sbjct 2039 CGCTGCTCGATGTCGGCTGCAAGACGGTGGCGAATATGATTAAGGGAAAGAGCCCCGAGG 2098
Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753
| ||| | ||||| ||||| ||
Sbjct 2099 AGATCAGGAAGACGTTTAATAT 2120
>seq455
Length=26256
Score = 93.3 bits (102), Expect = 7e-13
Identities = 162/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263
|| ||||| ||| | |||| ||||| ||||| ||| || | || || | ||||| ||
Sbjct 5750 GGACGCCAAAAGCTTGTCATTCTCGACGAGGCGGACAGCATGACATCTGGTGCCCAACAA 5691
Query 2019264 GCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323
|||||||| || ||||| | ||| | || || || ||||| | || ||||||
Sbjct 5690 GCCCTCCGCCGCACTATGGAGATATACTCTTCGACCACCCGCTTTGCATTTGCGTGCAAC 5631
Query 2019324 ACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGC 2019383
||| | | ||||||| |||| ||| | || ||||||||||||| ||| |
Sbjct 5630 CAGTCCAACAAGATCATCGAGCCCCTGCAGTCGAGATGTGCCATCTTGCGCTATGCAAGG 5571
Query 2019384 CTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439
|| || || || || ||| |||||| | | |||||||||| || || |||||
Sbjct 5570 CTAACAGATGCACAAGTCGTGAAGCGTCTTCTCCAGATTATCGAGGCAGAGAAGGT 5515
>seq1479
Length=10203
Score = 91.5 bits (100), Expect = 2e-12
Identities = 175/258 (68%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || | || |||| ||| ||||||||||||||||| || | ||||| ||
Sbjct 6867 CTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGA 6808
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||||| || || | ||| || || | ||| || | || | || ||
Sbjct 6807 GTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCC 6748
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || ||||| | ||| ||||| | || || | || || || || ||||| |||||
Sbjct 6747 GATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTC 6688
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| || |||||||||| | || ||||| || || || | | | || ||
Sbjct 6687 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACC 6628
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||||| || ||
Sbjct 6627 AGCATTGAAGAGTGTTGG 6610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915891215340821
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |