Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1537 140 2e-28
seq1071 123 2e-23
seq1847 100 2e-16
>seq1537
Length=49637
Score = 140 bits (154), Expect = 2e-28
Identities = 165/221 (75%), Gaps = 8/221 (4%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| ||||| ||||| ||| ||||||||| ||||| |||||||| ||| |||| ||
Sbjct 26401 CTCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA 26460
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || || ||||| |||||||||||||| || |||||||| | || | |||||||||
Sbjct 26461 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 26520
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938
|| | || || ||||| || | ||||| || | ||| || |||| |||
Sbjct 26521 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 26576
Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979
|| ||||| ||||| |||||||| || ||||| |||||||
Sbjct 26577 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGA 26617
>seq1071
Length=16463
Score = 123 bits (136), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 8/194 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | |||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 1765 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1824
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||||||||||||||||||||| ||||||||||| | || | |||||||||||
Sbjct 1825 TCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 1884
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || || |||||| |||| ||| ||
Sbjct 1885 TGGATCTTGCTCTTAAC--AT--TGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGAT 1940
Query 34942 GGTCTTTCCCGTGA 34955
|||||| || ||||
Sbjct 1941 GGTCTTGCCAGTGA 1954
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| |||||||||||||| ||||| ||||| || | | | ||||
Sbjct 853 AGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCC 912
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| || |||||||| | || | |||||||| ||
Sbjct 913 TCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCC 972
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || ||| || ||| | || | || | ||| || || | || ||||||
Sbjct 973 TGAATCTTTGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTC 1032
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || | |||||| ||||| ||||||||
Sbjct 1033 TTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1064
Score = 96.9 bits (106), Expect = 2e-15
Identities = 152/218 (70%), Gaps = 10/218 (5%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | || ||||||||||||||| || || || | | |||| ||||
Sbjct 1308 CAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATC 1367
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || |||||||| || |||||||| | || | |||||||| ||
Sbjct 1368 CTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATC 1427
Query 34885 GTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939
| || || || ||| ||| ||||| | || || || |||| ||
Sbjct 1428 CTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATGAT-----TCCACCTCAAGCGTG 1482
Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| ||||| || ||||| || || ||||||||
Sbjct 1483 ATCGTCTTCCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | || ||||||||||||||| ||||| || |||| ||||
Sbjct 1537 AGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCATCC 1596
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| || ||||| |||| || |||||||| | || | |||||||||||
Sbjct 1597 TCCAACTGCTTGCCCGCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 1656
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| ||| | ||| || || | || ||
Sbjct 1657 TGAATCTTCGACTTCAC--AT--TGTCGATAGTGTCAGACGACTCAACCTCCAAAGTGAT 1712
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || |||||||| || || ||||||||
Sbjct 1713 GGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1748
>seq1847
Length=30800
Score = 100 bits (110), Expect = 2e-16
Identities = 135/186 (73%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || || |||| |||| || || ||||| || || ||||
Sbjct 17777 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGA 17718
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | ||||||||||| | || || ||||| ||
Sbjct 17717 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGAC--AT- 17661
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || || |||||| |||| ||| |||||||| ||||| | ||||||
Sbjct 17660 -TGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTG 17602
Query 34964 ACAAAG 34969
|| |||
Sbjct 17601 ACGAAG 17596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325679546236841
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |