Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1480 96.9 1e-14 >seq1480 Length=20701 Score = 96.9 bits (106), Expect = 1e-14 Identities = 136/184 (74%), Gaps = 9/184 (5%) Strand=Plus/Minus Query 309665 CAACCTTCGATGC--GACAATCTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGC 309722 |||||||||| |||| ||| ||||| | || || |||||||||||||||||||| Sbjct 6760 CAACCTTCGACAACTGACA--CTCAATCAAATGAGCAATCGTCATACGAGAAGGAATGGC 6703 Query 309723 AAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTC 309782 | |||||||||| | |||||| | || | | | | |||||||||||||||| Sbjct 6702 GTGGGGGTTGATGATGAGGTCAGG-CACAATACCCT--CGCGAGTGAAAGGCATATCTTC 6646 Query 309783 TT-CAGGTACAATCAAACCAATAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCAC 309841 || |||| | | |||||| ||||| ||||| |||| | ||||| |||||||||| Sbjct 6645 TTGGCGGTA-GGTGATACCAATGGTTCCTTTTTGTCCGTGGCGAGAAGCGAACTTGTCAC 6587 Query 309842 CAAT 309845 |||| Sbjct 6586 CAAT 6583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951890892705192