Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1479 134 1e-26 seq1071 125 7e-24 seq1537 118 1e-21 seq1847 93.3 4e-14 >seq1479 Length=10203 Score = 134 bits (148), Expect = 1e-26 Identities = 833/1323 (63%), Gaps = 47/1323 (4%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109 |||||| ||| || ||||| || ||||||||||||||||| | ||||| |||| Sbjct 8126 GACTGGGACTGATCGATGAAGGCACCACGGTCAGCGGCCATCTGGACAATGGTGCGCTGG 8067 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 ||||||||| |||||||||| || |||||||| | || ||| | |||| Sbjct 8066 GAG---ATCTCCCAGACCGTCTTGTAGAGAGCCTTGATATCGGCCGGGATGTTGGGGATG 8010 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || || | || ||||| || | || ||| | ||| | | || Sbjct 8009 TTCTGGATGGATCCTCCGTCCGCAATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCC 7950 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| || ||| | || || | | || || || || ||||| || || || || Sbjct 7949 ATGTCGACCAAGTCTTTGAGCAACCAAGGGTTGACAACTTGGAACTCACCAGCCAGGACA 7890 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| || | ||| || | || || || |||||||| ||| | |||||| Sbjct 7889 CGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGG 7830 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||||| || ||||||||| ||| || || || |||||||| | |||| | | || Sbjct 7829 GAGGTCGAAGCAGTGGGCATGGGCGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTG 7770 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || | | ||| || | |||||||||| || | || || ||| |||||||||| Sbjct 7769 ATCTGGACCTTGAGGGAGTCCCAGTCCCACAGGTCGGTAGGAGTGACGCCCCACATGTCG 7710 Query 148470 TACTGCAGAATG-CCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 ||||| || | || || | || | | |||||||| | ||||| ||||| Sbjct 7709 TACTGGAGCTCGCCCTTGGACACTGGAGAT-CCCTCGTAGGTCTCGTACGTGCCGTGGAT 7651 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | |||| || | || | || |||| ||| || ||||| || || Sbjct 7650 CTGGGCCAACTCAACGGATGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGA 7591 Query 148589 GTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGC 148648 |||||| || ||| | ||| | |||| || || || || || || || Sbjct 7590 GTTGAGGTGCTTAGCCTCGGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGC 7531 Query 148649 AAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC 148708 ||| ||||| || || || ||| || | ||| | |||| | | | || ||| Sbjct 7530 AAGACCCTGGACACCGACAGCAACTGGTCTGTGACGGAAGTTGCTGCGCCTGGCCTCCTC 7471 Query 148709 GAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAAT 148768 || || |||| |||| || || ||||||| || || || || |||| ||| | Sbjct 7470 GACGGGGTAGTAGTTGACATCAATAATCTTGTTCAGGTTCTTAACAACAACCTGTGTGAC 7411 Query 148769 TCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATG-CATCG---GTT--CACGGC 148822 | | ||| | || ||||| || | | | ||| || || ||| | ||| Sbjct 7410 CTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACGTACGTTGGAAGGGC 7351 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 | || || | || |||||||| |||||| || || |||||| || ||||| | Sbjct 7350 AAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGT 7291 Query 148883 GCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939 |||||| || ||||| ||| || | |||||| || |||||||||| |||||| Sbjct 7290 GCACAGGTTAGAGCTGC---GGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 7234 Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAA 148996 || |||||||||| |||| | || || || || ||| | || | || | | Sbjct 7233 AGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTA 7174 Query 148997 CCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACC------CTCCTGCTCGTA 149050 || | || | ||| || |||| || || | |||||| |||| |||||| Sbjct 7173 CCAA---AGCTTCTGGGC-----CTTGATGGTC-TTGCGACCCTTCTTCTCCGACTCGTA 7123 Query 149051 --TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 | ||| | ||| ||||||| | || ||||| || | | || ||||| | | Sbjct 7122 TTTCTCGTAGAGAGC--CTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCG 7065 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 | ||||||||||| | ||| | |||| | | || |||||||| || ||||| || Sbjct 7064 TTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGG 7005 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 | |||||| ||||| | | ||| || || | || || ||| ||| | | Sbjct 7004 ATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTC 6945 Query 149229 AGGT-TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287 | || || || | ||| | || |||||||| ||||||| || | |||| || || Sbjct 6944 AAGTCCAAGAACTC-GAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACC 6886 Query 149288 CTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344 |||| ||||| |||||||| |||| | | ||||||| || || || | ||| Sbjct 6885 AGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCAT 6826 Query 149345 AGG 149347 || Sbjct 6825 GGG 6823 >seq1071 Length=16463 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || ||| ||| | ||||| | ||||||||| Sbjct 1552 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCA-TCCTCCAACTGCTTGCC 1610 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| |||| | ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 1611 CGCGAAAATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTT 1670 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | | ||| || || | |||| ||| ||||| ||||| || Sbjct 1671 CACATTGTCGATAGTGTCAGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTCAGGGT 1730 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 1731 CTTGACGAAAATCTGCAT 1748 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||||| |||||||| ||||| || |||||||| || || | | | |||||||||| Sbjct 1089 ATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCA-TCCTCGAGCT 1147 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||||||| |||| || ||||||||||| || |||||||| ||||| || |||| Sbjct 1148 GCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATCT 1207 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | || || | | ||| || || | || | || || |||| Sbjct 1208 TGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGG 1267 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || ||||| || ||||| Sbjct 1268 TGAGAGTCTTGACGAAGATTTGCAT 1292 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || ||||| |||| || ||| | |||||||||||||| || ||| | Sbjct 873 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCGAA 932 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 || || ||||||||||| || ||||| || ||||| || |||||| ||| | | Sbjct 933 GATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTTGACTTAACGTT 992 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| ||||| | | ||| || |||| || | ||| || || |||| || || || Sbjct 993 GTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGAC 1052 Query 133649 GAAAATCTGCAT 133660 ||||||||||| Sbjct 1053 AAAAATCTGCAT 1064 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| || ||| | | | ||||| |||||||| || Sbjct 1324 GTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCA-TCCTCCAGCTGCTTACC 1382 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || ||||| || ||||| || |||||| ||| Sbjct 1383 AGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGGATCTTCGACTT 1442 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| || |||| | ||||| || | |||| || || || || ||||| Sbjct 1443 CACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCGTCTTCCCCGTAAGAGT 1502 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 1503 CTTGACGAAAATCTGCAT 1520 >seq1537 Length=49637 Score = 118 bits (130), Expect = 1e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || | ||| | | | ||||||||||||||||| Sbjct 26419 GTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 26477 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || || || |||||||| |||||| ||| Sbjct 26478 GGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTT 26537 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | |||||| || | ||||| || ||||| ||||| || Sbjct 26538 GACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGT 26597 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || ||||| || |||||| || Sbjct 26598 CTTCACGAAGATTTGCATGACT 26619 >seq1847 Length=30800 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| || | || || ||||||||||| ||||| || || |||||| Sbjct 17742 TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTG 17683 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | || |||| || ||| || || | ||||| | Sbjct 17682 TCCTGGATCTTCGACTTGACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATG 17623 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| |||| || || ||||| Sbjct 17622 GTCTTGCCCGTCAAGGTCTTGACGAA 17597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483400623224360