Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1537 102 2e-16
seq1071 96.9 8e-15
>seq1537
Length=49637
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | || ||||| || ||||| ||||
Sbjct 26600 AAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGACACTATCGACAAT 26541
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || |||||| |||||| || | || ||||||
Sbjct 26540 GTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTGATCTTC 26481
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || ||||| | || | | || |||||| ||||||| |||||
Sbjct 26480 GCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCC 26421
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||||||| | || |||||||||||
Sbjct 26420 ACTCTTCACTTGGTCTTGAGACTTCG 26395
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||||| || | ||||||||| ||||| ||||||| || ||||| | | ||
Sbjct 26395 CGAAGTCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 26454
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| ||||| || |||||||| ||||||||||| || || || ||
Sbjct 26455 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG 26498
>seq1071
Length=16463
Score = 96.9 bits (106), Expect = 8e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||||||||| || || ||||||
Sbjct 1745 CAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCTGAC 1686
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || || || ||| |||||| ||
Sbjct 1685 ACTATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 1626
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| | || ||||| || ||||||||||| ||||| | ||| || ||| |||||| |
Sbjct 1625 CGCTTGATTTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTACAACATT 1566
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| ||||| |||
Sbjct 1565 CAGAAGGAGTCGACTCTCCAC 1545
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || | || ||||| || || ||| | || || || ||| |||
Sbjct 1061 CAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCAGAC 1002
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||| || || || || || |||||| ||
Sbjct 1001 ACCATTGACAACGTTAAGTCAAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 942
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || ||||| ||||| || ||| |||||| ||
Sbjct 941 CGCCTGATCTTCGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAACATC 882
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||| |||||||||
Sbjct 881 CAGAAGGAGAGCACTCTTCAC 861
Score = 93.3 bits (102), Expect = 1e-13
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| ||||| || || || ||||||| || || || || ||||
Sbjct 1278 CAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCGGATACCATCGATAA 1219
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||||||||| || || || || |||||| || | || || ||
Sbjct 1218 CGTCAAGTCCAAGATTCAAGATAAGGAGGGCATCCCACCGGACCAGCAGCGCCTGATTTT 1159
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || |||||| | || ||||| | |||||| | ||||||||| ||||||| |||||
Sbjct 1158 CGCGGGCAAGCAGCTCGAGGATGGCCGTACTTTGTCTGATTACAACATCCAGAAGGAGTC 1099
Query 206364 TACTCTTCACCTTGTT 206379
|| | || ||||||
Sbjct 1098 CACATTACATCTTGTT 1083
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || |||||||| | || |||||| || ||
Sbjct 1517 CAGATTTTCGTCAAGACTCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCCGAT 1458
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || || || || |||||| ||
Sbjct 1457 ACCATTGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 1398
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || |||||| |||| ||||| | || ||| ||||||||||| |
Sbjct 1397 CGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAACATT 1338
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||||||||| ||| | ||| || | || ||
Sbjct 1337 CAGAAGGAGTCTACTCTGCACTTGGTTCTGCGTCTGCG 1300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181770240598219
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |