Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 98.7 9e-16
seq1479 82.4 7e-11
>seq1071
Length=16463
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| |||| |||||| || | | ||||| || ||||||||||| ||| || |||
Sbjct 1299 ACGCAGACGCAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGT 1358
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| || ||||| ||||| | | |||| || ||||| || || || || || ||
Sbjct 1359 GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACC 1418
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| ||||| || || |||| | || | ||||||| | ||||| || |
Sbjct 1419 CTCCTTATCCTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATGATTCCACCTCAAG 1478
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| | ||| || || || ||||| || | ||||||||||||
Sbjct 1479 CGTGATCGTCTTCCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520
>seq1479
Length=10203
Score = 82.4 bits (90), Expect = 7e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296
|| |||||||| || | || || || |||||||||||||| | ||| || ||||| | |
Sbjct 6572 TATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATC 6513
Query 148297 ATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGG 148356
||||||||||| | ||| ||||| | | | |||||| ||| | || |||
Sbjct 6512 ATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAGGCGGAGAAGGTATGAACGCTCAAGG 6453
Query 148357 GTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
|| ||| | |||||||| | ||| | ||||| | |||||| || |||
Sbjct 6452 GTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTAAAGGACGGC 6403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476591307440040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |