Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2032 84.2 3e-11 >seq2032 Length=15395 Score = 84.2 bits (92), Expect = 3e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290 ||||||||| |||||||| ||| ||||| |||| |||||||||| |||| || || Sbjct 5688 CAGCTGGTCGACGCCCTGCCCCGTGTAGTCTGTCTGAGCGTCCACGTACTTGGCGCCGAA 5629 Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 ||| | ||||||||||||||| || || || || || || Sbjct 5628 GTGACGCCACTGGAAGCCGTATACGGGGCCAAGATCACC 5590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583463646669600