Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2510 205 1e-46 seq1479 114 2e-19 seq455 86.0 9e-11 >seq2510 Length=23295 Score = 205 bits (226), Expect = 1e-46 Identities = 357/507 (70%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || || || ||||| || |||||| | |||| Sbjct 9128 GATCTGGCAGATGTAC-AAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACC 9186 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| || || | ||||| |||||| | |||||| Sbjct 9187 TCTCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCT 9246 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| ||| |||||||| || || || || ||||||||| || Sbjct 9247 CCCACGTTCTCGC-TTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAG 9305 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | ||||| ||| | |||||||| || | || ||||| ||||| ||| Sbjct 9306 CGCTTCAGCAGCGAGGTTCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATG 9365 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | | Sbjct 9366 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 9425 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | || | || ||||||| |||||||| || | || | | | ||| ||||| Sbjct 9426 GCCCAGC-GCACATACCTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGC 9484 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 ||||||||| | | ||||||| |||| | || || || ||||||| |||| || || Sbjct 9485 CGACTGGGCTGTCAGGTGGATC--CAAGACAAGGATTCCAC-CTTTGCCCAGCGCCTGGT 9541 Query 1456190 CGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 | ||| || | ||| ||||| ||||| ||||| ||| ||| | | || || ||||| Sbjct 9542 TGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCT 9601 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||| || |||||| | || || Sbjct 9602 CAAGAAGCGTGGTCTCATGGCTGGCCT 9628 Score = 89.7 bits (98), Expect = 7e-12 Identities = 153/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1456524 TCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGC 1456583 ||||| |||||| |||| ||||||| ||||||| | | ||| | || || |||| Sbjct 9739 TCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACAGAGGCACTCCCATGTGCGC 9798 Query 1456584 TCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCT 1456643 | ||||||||||||||| | | ||| || ||||||| | || ||||||||| | || Sbjct 9799 TGCTCGGCATGAACGCCAAC-TTGATGAAGCAATACATTG-AGTTCGTCGCCGACAGGCT 9856 Query 1456644 GCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGG 1456703 ||| | ||||| | |||||| |||| | | ||||||| ||| | |||| Sbjct 9857 GCTGCTTTCTCTCGG-TAACGAGAAGTTCTACAAGTCTACCAACCCCTTCGACTTCATGG 9915 Query 1456704 AGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 || ||||| || | || ||||||||||| || ||| Sbjct 9916 AGAACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAG 9953 >seq1479 Length=10203 Score = 114 bits (126), Expect = 2e-19 Identities = 336/510 (66%), Gaps = 22/510 (4%) Strand=Plus/Plus Query 262912 CAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAG 262971 ||||| || | |||||||| | ||||| |||| ||||||||| || |||| || ||| Sbjct 7774 CAGCACGGTGTCCGCAACTCCCTTCTCGTTGCGCCCATGCCCACTGCTTCGACCTCCCAG 7833 Query 262972 ATCCTGGGCAACACCGAGGCGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGT 263030 || || ||| || |||| |||||| ||| ||| ||||||||| ||||||| || Sbjct 7834 ATTCTCGGCTTCAACGAGTGCTTCGAGC-CATACACCTCGAACATCTACTCGCGCCGTGT 7892 Query 263031 GCTCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGG 263090 || | || || || || ||||||| || |||| | |||| | || Sbjct 7893 CCTGGCTGGTGAGTTCCAAGTTGTCAACCCTTGGTTGCTCAAAGACTTGGTCGACATGGG 7952 Query 263091 CCTGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAG-GGCTCGGTGCAGGGCT 263149 |||||| | | || | |||| ||||||||| || | || || | ||| | Sbjct 7953 ACTGTGGTCTGACAACATGAAGAACCGCATCATTGCGG-ACGGAGGATCCATCCAGAACA 8011 Query 263150 TTGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGC 263209 | | || | ||| ||||| |||||||||||| |||||| || |||||| | Sbjct 8012 TCCCCAACA------TCCCGGCCGATATCAAGGCTCTCTACAAGACGGTCTGGGAGATCT 8065 Query 263210 CCAACCGGGTGACCATTG---ATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCC 263266 || | || ||||||| | ||||| || ||||| | ||| |||| ||| || Sbjct 8066 CCCAGCGC---ACCATTGTCCAGATGGCCGCTGACCGTGGTGCCTTCATCGATCAGTCCC 8122 Query 263267 AGTCGCTCAACCTGTACCTCGCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACG 263323 |||| |||||| | || | ||||| || || | ||| |||| || |||||| Sbjct 8123 AGTCCCTCAACATCCACATGAAGGACCCAACAATGGGCAAGA---TCACCTCCATGCACT 8179 Query 263324 CCTATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTG 263383 || ||| | |||||||||||| ||||||||||| || || ||| | |||| Sbjct 8180 TTGCTGGCTGGAAGCTCGGCCTCAAGACCGGCATGTACTACCTCCGTACCATGGCCGCCT 8239 Query 263384 CCAACGCCATTCAATTCACCGTCGATCAGG 263413 | | || || ||||||||||| |||| Sbjct 8240 CGGCTCCTATCCAGTTCACCGTCGACCAGG 8269 Score = 111 bits (122), Expect = 2e-18 Identities = 183/262 (70%), Gaps = 8/262 (3%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || ||||| ||||| || || || | | ||| || || ||||| || | ||| Sbjct 6610 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGAC 6669 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| ||||||||||| |||||| || || | ||||| Sbjct 6670 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCA 6729 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACA--CAAGG--TGCGCGCCGCGGGCGCCTA 260100 ||| | ||||| || ||||| || | ||| || | | || ||| | || || || Sbjct 6730 AAGACTGCCGGAGGTATCGGATT----GAACATCCATCGTATCCGTGCCACCGGTGCATA 6785 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | | || || |||||||| | || ||||| | || |||||||| ||||| || ||| | Sbjct 6786 CATTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAA 6845 Query 260161 CACGGCGCGCTACGTCGACCAG 260182 ||| || | ||||| |||||| Sbjct 6846 CACTGCCAGATACGTTGACCAG 6867 >seq455 Length=26256 Score = 86.0 bits (94), Expect = 9e-11 Identities = 169/248 (68%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869 ||||| || || ||| ||||| | | || || ||| ||| || || || || | Sbjct 5515 ACCTTCTCTGCCTCGATAATCTGGAGAAGACGCTTCACGACTTGTGCATCTGTTAGCCTT 5574 Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929 || |||||| ||||||||| | |||||||| |||||||| | | ||| |||| Sbjct 5575 GCATAGCGCAAGATGGCACATCTCGACTGCAGGGGCTCGATGATCTTGTTGGACTGGTTG 5634 Query 332930 CAGGCCAGGGCAAACCGCGTCGT--ATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCT 332987 || || | ||||| || || || | |||| | ||||| || |||||||| | Sbjct 5635 CACGCAAATGCAAAGCGGGTGGTCGAAGAGTATA--TCTCCATAGTGCGGCGGAGGGCTT 5692 Query 332988 GTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGT 333047 ||||||| | | || | || ||| ||||||||||| |||| | ||| ||||| || | Sbjct 5693 GTTGGGCACCAGATGTCATGCTGTCCGCCTCGTCGAGAATGACAAGCTTTTGGCGTCCTT 5752 Query 333048 GCGGCAGA 333055 | || ||| Sbjct 5753 GAGGGAGA 5760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177489147312918