Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 208 1e-48
seq2510 114 2e-20
>seq1479
Length=10203
Score = 208 bits (230), Expect = 1e-48
Identities = 524/785 (67%), Gaps = 16/785 (2%)
Strand=Plus/Minus
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || || || || | ||| || ||||| ||| || || |||||||| | || ||
Sbjct 7272 GATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAA 7213
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470
|| | || || ||| ||||||| |||| ||| || | ||||| | || || ||
Sbjct 7212 AGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGAT 7153
Query 69471 TACGGTCTTGTAACGCTTCTCTTTT---TCATATTGT--GTATATAGCCGTTCGAATTCA 69525
||||||| || ||||| | || |||| ||| | |||| ||||| |||
Sbjct 7152 ---GGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAGCC--TCGAACTCA 7098
Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585
|| || |||| || |||||||||| ||||| || || ||||| | | ||| || |
Sbjct 7097 TCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCACCG 7038
Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCT 69644
| | || ||| || ||||| || ||||| || ||||| ||||| || || || || |
Sbjct 7037 TTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAG-TCACG 6979
Query 69645 GGTTCTATTTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703
|| | ||| || || || || | || | ||| | |||| ||| | | |||||
Sbjct 6978 GGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAA-CTCGAAGACATCAG 6920
Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763
|||||||| || | ||| || || | | | || || || || || || ||||| || |
Sbjct 6919 CGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAA 6860
Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823
||||||||||||||| || |||| | ||||| |||| ||||| || || || || |
Sbjct 6859 CGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGT 6800
Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTC 69883
| || || | ||| || || | || || ||| | || | || || ||||
Sbjct 6799 TGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCCGATACCTC 6740
Query 69884 CTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTAT 69943
| || | || ||||| | ||||| || | ||||||||| |||||||| || ||||
Sbjct 6739 CGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCAATACTAT 6680
Query 69944 CATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAA 70003
| || |||||| | | || ||| |||| || ||| || || ||||| |
Sbjct 6679 CCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCATTGA 6620
Query 70004 ATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAG 70063
| | ||| || || ||||| ||||| |||| ||| | || |||||||| ||||| |
Sbjct 6619 AGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCAATGG 6560
Query 70064 CTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGT 70122
| || |||||| | | | ||||| || | ||| |||||||| | ||| ||||| ||
Sbjct 6559 CCTTCTCAATATCCTCGCCG-TGAATGCCAACCGCCACACGCATAATCATGTGCTGTGGC 6501
Query 70123 CGTTC 70127
| |||
Sbjct 6500 CTTTC 6496
>seq2510
Length=23295
Score = 114 bits (126), Expect = 2e-20
Identities = 175/249 (70%), Gaps = 3/249 (1%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||||||||||||| || || |||||||| | || | ||||| || || |||||
Sbjct 9686 GCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAG 9627
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|||| ||| ||||||||||| |||||||| || || | || || || || || |||||
Sbjct 9626 GCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAA 9567
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792
||| || || || || || || ||||| || | || | | | | ||| || ||
Sbjct 9566 GATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTTGTCTTG 9507
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | ||||| || || |||||||| | ||||| || || || || |||||
Sbjct 9506 GATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATT 9447
Query 39853 AAAGAGATA 39861
||||| ||
Sbjct 9446 GAAGAGGTA 9438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686880130143960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |