Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1479 288 1e-72 seq2510 120 4e-22 >seq1479 Length=10203 Score = 288 bits (318), Expect = 1e-72 Identities = 1166/1810 (64%), Gaps = 43/1810 (2%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 8225 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCA-GCCAGCAAAGTGCATGGAGGT 8167 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 || |||| ||| ||||| | |||| || ||| | ||| |||| | || ||| Sbjct 8166 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT--GATCGATG 8109 Query 110480 AAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAACT 110536 ||| || || | || ||||| | |||| | || || ||||| || Sbjct 8108 AAGGCACCACGGTCAGCGGCCATCTG---GACAATGGTGCGCTGGGAGATCTCCCAGACC 8052 Query 110537 GTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCC 110596 || |||||| ||||||||| | ||||| | | ||| ||||||||||| || || Sbjct 8051 GTCTTGTAGAGAGCCTTGATATCGGCCGGGATGTTGGGGATGTTCTGGATGGATCCTCCG 7992 Query 110597 GCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTG 110656 || | ||| | | |||||| | | ||||| || || || | | ||| ||| Sbjct 7991 TCCGCAATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTTG 7932 Query 110657 ACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTT 110716 | | |||||||| |||||||| || ||| | | | ||||||||| Sbjct 7931 AGCAACCAAGGGTTGACAACTTGGAACTCACCAGCCAGGACACGGCGCGAGTAGATGTTC 7872 Query 110717 GTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 110776 | |||||||| || ||||| || || || | || || | ||| || || || ||| Sbjct 7871 GAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCAGTGGGC 7812 Query 110777 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACA 110836 || || || | | ||| ||| || | ||| | || |||||| | ||||||| Sbjct 7811 ATGGGCGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGGGAG 7752 Query 110837 TCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTG 110895 |||||||| | | | | || | || |||||||||| |||| ||| | || | Sbjct 7751 TCCCAGTCCCACAGGTCGGTAGGAGTGACGC-CCCACATGTCGTACTGGAGCTCGCCCTT 7693 Query 110896 GGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCT 110955 |||| | ||||| ||||| |||| || || | || ||| | ||||| ||| | Sbjct 7692 GGACACTGGAGATCCCTCGTAGGTCTCGTACGTGCCGTGGATCTGGGCCAACTCAACGGA 7633 Query 110956 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 111015 || || | |||| || ||||| |||||||| | | || | | ||| || || Sbjct 7632 TGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGTGCTTAGCCTC 7573 Query 111016 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 111075 ||||| || | |||| | ||| |||| || ||||| || ||||| | Sbjct 7572 GGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCTGGACACCGAC 7513 Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGC---GCAGTCTCAACGGGATAAAAATT 111132 | ||| |||||||| || | || | ||| || ||| ||||| || | || Sbjct 7512 AGCAACTGGTCTGTGACGGAAGTTGC---TGCGCCTGGCCTCCTCGACGGGGTAGTAGTT 7456 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192 ||||| | ||| || || || ||||| || ||||| || ||||| || | Sbjct 7455 GACATCAATAATCTTGTTCAGGTTCTTAACAACAACCTGTGTGACCTCGTGAAGCTTCTG 7396 Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 | || | |||| | | | || ||| |||||||||| | |||||||| || Sbjct 7395 GAAGTCGTATGTGCCGTTGGCCATGTCAACGTACGTTGGAAGGGCAAGGGATGCCAAGTT 7336 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 || || || |||||| | | | |||||| | ||| || || || | ||| || || Sbjct 7335 ACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCACAGGTTAGAGCT 7276 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 || || || | ||||| ||||| ||||| |||||| ||||||||||| | ||| Sbjct 7275 GCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACAT 7216 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTG 111431 | | || | || ||||| ||||| || | |||||| | | ||||| | || | | || Sbjct 7215 GAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTT 7156 Query 111432 GTACAATGGCGTT--GGCCCGTC-CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488 | |||| || | ||| || ||||| |||||| || |||||| || || |||| Sbjct 7155 G----ATGGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAGCCTCGAACT 7100 Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGA 111547 | ||||| |||| | | || || || || || || || | |||| ||| | | Sbjct 7099 CATCACCGTAAACGTCCGCCAATCCAGG-GCATTCGTTGGGGCACATGAGAGTCCAGTCA 7041 Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 || | |||||| ||||||||||| || || || ||||| || | | || | || Sbjct 7040 CCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCA 6981 Query 111608 C-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666 | ||| || | || || | || ||||| | || || | |||||| | || ||| Sbjct 6980 CGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAAGACATC 6922 Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 111722 |||||||||||||||| ||||| |||| | || | | | | ||| | || | Sbjct 6921 AGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCGCTTGTTG-CCACCCTGGT 6863 Query 111723 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 111782 || || | || ||| ||| || ||||| ||||| |||| ||||| | || | | Sbjct 6862 CAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTC 6803 Query 111783 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 111842 | || || || ||| | |||| | | | |||||||| || || |||| Sbjct 6802 CGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCCGATAC 6743 Query 111843 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 111902 | || || ||||||||| ||||| | | || || |||||||||| | || Sbjct 6742 CTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCAATAC 6683 Query 111903 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCA 111961 |||||||| || ||| | |||||| |||| ||| || || ||||||||||||| Sbjct 6682 TATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGTACCAGCA 6624 Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTATGTCT 112019 |||||||| ||||| | ||||| |||| || |||| ||||| || |||||||| Sbjct 6623 TTGAAGAGTGTTGGGGAGGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATGTCT 6566 Query 112020 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACT 112079 | | | | ||||| || || ||||| ||||| | || || ||||| | ||||| || Sbjct 6565 CAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATCATGTGCT 6506 Query 112080 GTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGA 112139 |||| |||| | | ||||||| || || |||| || ||||||||| |||| Sbjct 6505 GTGGCCTTTCAGCAACGTTGCCATCAAGGCGGAGAAGGTATGAACGCTCAAGGGTCTTGA 6446 Query 112140 GACCAAAGTA 112149 |||||||| Sbjct 6445 AGCCAAAGTA 6436 >seq2510 Length=23295 Score = 120 bits (132), Expect = 4e-22 Identities = 338/511 (66%), Gaps = 11/511 (2%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||||||||||||||| ||||| || || || || ||||| || || | ||||||||| Sbjct 9671 GTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCAGCCATGAGACC 9612 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||||| | ||| || |||||||||||||||||||| || Sbjct 9611 ACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGC 9552 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| ||||| | ||| |||| | | ||| | | | ||| | | || Sbjct 9551 AGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTTGTCTTGGATCCACCTGACAGC 9492 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||| | |||||||||| || || || | || | |||||| | || | | | | Sbjct 9491 CCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGA--GGTATGTG 9434 Query 122910 TTCAGATCC--ATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACC 122967 | | || ||||| |||||| |||| || | || ||||| ||| | |||| Sbjct 9433 CGCTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATG 9374 Query 122968 ATTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATC 123026 | || || || | ||| | ||||||| |||| || || || |||||||| | Sbjct 9373 TTCTCGATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATTTGAACCTC-GC 9316 Query 123027 CGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCA 123085 || || | | || ||||| |||||||| || ||| | || ||||| || | Sbjct 9315 TGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGA 9256 Query 123086 GGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGAT 123142 | | || ||||| | |||| ||||| | || | |||||||||| ||| | Sbjct 9255 GAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTTCCAGTCGTGAAGGT 9196 Query 123143 CTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 | ||||| | |||| || || |||||||| Sbjct 9195 CCTTGGAGAGGTCAATCTCCTCTGCAGTCCA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628005787514400