Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1479 291 1e-73 seq2510 140 4e-28 >seq1479 Length=10203 Score = 291 bits (322), Expect = 1e-73 Identities = 1132/1761 (64%), Gaps = 65/1761 (4%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| || |||||||| || |||||||| || | ||||| |||| Sbjct 8225 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTG 8166 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | ||||| | |||| || ||| | ||||| |||||||||||| Sbjct 8165 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATGAAG 8106 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013 || || || || ||||| | | || || | | || | || ||||| || ||| Sbjct 8105 GCACCACGGTCAGCGGCCATCTGGA-CA-ATGGTGCG-CTGGGAGATCTCCCAGACCGTC 8049 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 ||||||| ||| ||||| | ||||| | ||| || ||||||||||| || || Sbjct 8048 TTGTAGAGAGCCTTGATATCGGCCGGGATGTTGGGGATGTTCTGGATGGATCCTCCGTCC 7989 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT---------TTTGAGA 118124 | ||| | | |||||| | | ||||| || || || | |||||| Sbjct 7988 GCAATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCTTTGAG- 7930 Query 118125 TCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 118184 | ||| | | |||||||| |||||||| || ||| || | | ||| Sbjct 7929 -CAACCAAGGG-------TTGACAACTTGGAACTCACCAGCCAGGACACGGCGCGAGTAG 7878 Query 118185 ATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCT 118244 || || | ||||||||||| |||||||| ||| || | || |||| || || || Sbjct 7877 ATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTCGAAGCA 7818 Query 118245 GTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTG 118304 ||||||||||| || | ||||||| ||| |||| ||| | | | | || | ||||| Sbjct 7817 GTGGGCATGGGCGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTG 7758 Query 118305 AGAGCGTCCCAGTCGTA---GTTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359 || | ||||||||| | || | || || | |||| |||| || |||||| Sbjct 7757 AGGGAGTCCCAGTCCCACAGGTCGGTAGGAGTGACGCCCC-----ACATGTCGTACTGGA 7703 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 | || | |||| |||| |||||||| | ||||| || | ||| | | || |||| Sbjct 7702 GCTCGCCCTTGGACACTGGAGATCCCTCGTAGGTCTCGTACGTGCCGTGGATCTGGGCCA 7643 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 | || | || | || |||| || || || ||||| || | | || | Sbjct 7642 ACTCAACGGATGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGT 7583 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 ||| |||||| |||||| || | || ||| | ||| |||| || ||||| | Sbjct 7582 GCTTAGCCTCGGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCT 7523 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGAT 118599 ||||||||| ||| ||| | || | | || || || ||| ||||| | Sbjct 7522 GGACACCGACAGCAACTGGTCTGTGACGGAAGTTGCTGCGCCTGGCCTCCTCGACGGGGT 7463 Query 118600 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 118659 | | || ||| |||| | | || || || || ||||||| ||||| || |||| Sbjct 7462 AGTAGTTGACATCAATAATCTTGTTCAGGTTCTTAACAACAACCTGTGTGACCTCGTGAA 7403 Query 118660 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 118719 |||| | | | || | ||| | | | || ||| | |||||||| | || | Sbjct 7402 GCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACGTACGTTGGAAGGGCAAGGGATG 7343 Query 118720 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 ||| |||||||| | |||||| | ||| |||||| | ||| |||||||||| || Sbjct 7342 CCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCACAGGT 7283 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | || || ||||| || | |||||| || || ||| ||| || |||||||||| Sbjct 7282 TAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGT 7223 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCG 118898 | | |||| | || | || ||||| || || |||| |||||| | | ||| | | || Sbjct 7222 ACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCT 7163 Query 118899 GCAGCTGGCACAGTGGCGTTGGCTCG-CCCCTCTTC-----CTCGTACTTTGTGTAGAGG 118952 | || | ||| ||| || ||| ||||| |||||| || |||||| Sbjct 7162 GGGCCTTG----ATGGTCTTG---CGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGA 7110 Query 118953 GCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAG 119011 || || ||||| ||||| | || | | || || || || | ||||| | ||| Sbjct 7109 GCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGG-GCATTCGTTGGGGCACATGAG 7051 Query 119012 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 119071 || ||| | ||| || |||||| |||||||||||||| || ||||||||||| || | Sbjct 7050 AGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTA 6991 Query 119072 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 119131 ||| | || || || |||| || | || || || | ||| ||||| || || Sbjct 6990 GAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTC 6931 Query 119132 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ 119185 | || ||| |||||||| || || | || | |||| | || | | || Sbjct 6930 GAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACC---AGGGCGCTTGTT 6874 Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245 ||| |||||| || || || |||||| ||| || || || ||||| |||| |||||| Sbjct 6873 GCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACC 6814 Query 119246 ATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTG 119305 | || | || || || || ||| | |||| | || | ||||||| Sbjct 6813 GTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTT 6754 Query 119306 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 119365 || || ||||| || || ||||||||| || || | |||| || | ||||| Sbjct 6753 CAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGAT 6694 Query 119366 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-G 119424 || || || || |||| | ||| | ||||||| |||| || |||||| | Sbjct 6693 ACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTG 6635 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTT 119482 |||||||||| |||||||| ||||| | ||||| |||| || |||| ||||| Sbjct 6634 GTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAA-GTA-TTTGGAAGACATGAG 6577 Query 119483 GTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 || ||| ||||| | | | ||| || || |||||||| || | || || ||||| Sbjct 6576 GTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCAT 6517 Query 119543 AAACATGTATTGGGGTGTTTC 119563 || ||||| || || |||| Sbjct 6516 AATCATGTGCTGTGGCCTTTC 6496 >seq2510 Length=23295 Score = 140 bits (154), Expect = 4e-28 Identities = 526/811 (65%), Gaps = 13/811 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| | || |||||||| |||||||| ||||| || ||| | ||| |||||||| Sbjct 9970 TAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 9911 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA-AATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | || || | || | || | || | || || | Sbjct 9910 AAGTCGAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTA-CCGAGAGAAAGCAGCAGCCT 9852 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||||||||| | |||| | || |||||| |||| || ||| Sbjct 9851 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 9792 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 |||||| || || | |||| | | ||| || | ||||| || | || | || Sbjct 9791 TGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGACAGCCTCGGTGATGACATCCTG 9732 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCCT 130025 | | || | ||| || | | | || || | |||||| ||| || || Sbjct 9731 GACAGCCTGCTTGCTTGGGCGGTGTCT-AAGGTGCGAGAAGAGGAGGCAGGCGAAGTCAG 9673 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 |||||||||||| || ||||||||||| || || ||||| || || | |||||||| Sbjct 9672 TGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCAGCCATGAGAC 9613 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 9612 CACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGG 9553 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATC 130204 ||||| |||| || |||| ||||||| | | | |||| | | |||| | | Sbjct 9552 CAGCGAAGGCAACCAGGCGCTGGGCAAAGGTG-GAATCCTTGTCTTGGATCCACCTGACA 9494 Query 130205 GCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTC 130264 ||||| | ||||| |||| ||| || |||| ||||| ||| || | ||||| | | Sbjct 9493 GCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGAGGTATGTG 9434 Query 130265 TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACC 130324 | | | || |||||||| | || ||||| || ||||| ||| | || | Sbjct 9433 CGCTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATG 9374 Query 130325 ATTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATC 130383 | || || ||| || || ||||||| |||| || || || || ||||| | Sbjct 9373 TTCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCTGGGATTTGAACCTC-GC 9316 Query 130384 TGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCA 130442 ||| || | | || ||||| |||||||| || ||| | || || || || | Sbjct 9315 TGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGA 9256 Query 130443 GGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGAT 130499 | | | ||||| | | |||| || || | || | |||||||||| ||| | Sbjct 9255 GAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTTCCAGTCGTGAAGGT 9196 Query 130500 CCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||| ||||| || | |||||| |||||||| Sbjct 9195 CCTTGGAGAGGTCAATCTCCTCTGCAGTCCA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618409388060840