Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1479 280 2e-70 seq2510 127 2e-24 >seq1479 Length=10203 Score = 280 bits (310), Expect = 2e-70 Identities = 958/1467 (65%), Gaps = 47/1467 (3%) Strand=Plus/Plus Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214 || ||||| |||| ||||||||| || |||| || || ||||| | ||| | Sbjct 6436 TACTTTGGCTTCAAGACCCTTGAGCGTTCATACCTTCTCCGCCTTGATGGCAACGTTGCT 6495 Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274 | ||| |||||| ||||| | ||||| ||||| | || ||||| || || || ||||| Sbjct 6496 G-AAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGAGGATATTGA 6554 Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCA 104332 | | | ||||||||| || ||||| |||| || |||| ||||| | ||| Sbjct 6555 GAAGGCCATTGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCCTCCCCA 6612 Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392 || ||||||||||||||||||||| |||| |||| |||||| | ||| || Sbjct 6613 ACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATG 6672 Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452 |||||||| || | |||||||||| || || | | ||||| ||||||||| Sbjct 6673 AAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAG 6732 Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512 || || ||||| || || |||||||| | | | |||| | ||| Sbjct 6733 ACTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACCGGTGCATACATTGCC 6792 Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || || || || | || | ||||| |||| ||||| ||||| || ||| ||| || Sbjct 6793 GGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCC 6852 Query 104573 CGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCC 104628 | || || | || | | ||| | | | || | |||| ||||| ||||||| Sbjct 6853 AGATACGTTGACCAGGGT-GGCAACAAGCGCCCTGGTGCCTTCGCCATCTATGTTGAGCC 6911 Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688 ||||||||| ||| || | |||||| | || ||| | ||||| || | ||||| | Sbjct 6912 ATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGT 6971 Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748 || ||| || | |||| |||||||||||| || ||||||||||||||| | ||||| Sbjct 6972 CCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGA 7031 Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCG 104807 | ||| || | ||| ||||| | || || || || || ||||| | | || | Sbjct 7032 GAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGACGTTT 7090 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG-----GAAGAA-GGTCGGGCGA 104861 ||||| ||||| || || || ||| || |||||| |||||| ||||| || Sbjct 7091 ACGGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCGCAAGA 7150 Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921 | | || |||| || | ||| | | |||||| ||||||| || ||||| | Sbjct 7151 CCATCAAGG-CCCAGAAGC-----TTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAG 7204 Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981 | | || | |||| | ||||| || || || |||| ||||| || || ||||| | | Sbjct 7205 GAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCG 7264 Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041 || ||| || || || || || || || || | || | | | ||||||| Sbjct 7265 GTACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAGG 7324 Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG- 105100 || ||||||||| | ||||| | || || || | ||| || || || | ||| | Sbjct 7325 TTGCCGTGTGTAACTTGGCATCCCTTGCCCTTCCAACGTACGTTGA--CATGGCCAACGG 7382 Query 105101 -ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAG 105159 |||| || | | || || ||||| || || | ||| || ||||| |||| Sbjct 7383 CACATACGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACCTGAACAA 7442 Query 105160 AGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCG 105219 |||||||| || | |||||||| ||| || | || | | ||| | Sbjct 7443 GATTATTGATGTCAACTACTACCCCGTCGAGGAGGCCAGGCGCAGCAACTTCCGTCACAG 7502 Query 105220 TCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG----TCGCCACG 105275 ||| ||| | ||||||| |||||||| || |||| ||||||| | |||| Sbjct 7503 ACCAGTTGCTGTCGGTGTCCAGGGTCTTGCTGATG----CATTCTTGGCCCTCCGCCTGC 7558 Query 105276 CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335 | || |||||| ||| || ||| | |||| | | || ||||||||||| || |||| Sbjct 7559 CCTTCGATTCCCCCGAGGCTAAGCACCTCAACTCCCAGATCTTTGAGACCATCTACCACG 7618 Query 105336 CCGCTCTTGA-GGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 105392 ||| |||| || ||| |||||||| || | | || | || || |||| | Sbjct 7619 GTGCT-TTGACTGCATCCGTT--GAGTTGGCCCAGATCCACGGCACGTACGAGACCTACG 7675 Query 105393 AGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG 105451 |||| ||||||| || |||||| | ||| || | || ||||||| || | || | Sbjct 7676 AGGGATCTCCAGTGTC-CAAGGGCGAGCTCCAGTACGACATGTGGG-GCGTCACTCCTAC 7733 Query 105452 C-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510 | | | |||||||| | ||||||| | |||||| || | ||| | || ||| Sbjct 7734 CGACCTGTGGGACTGGGACTCCCTCAAGGTCCAGATCAAGCAGCACGGTGTCCGCAACTC 7793 Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570 || ||| | || || ||||| || || || ||| | || || | || || || || Sbjct 7794 CCTTCTCGTTGCGCCCATGCCCACTGCTTCGACCTCCCAGATTCTCGGCTTCAACGAGTG 7853 Query 105571 CTTTGAACCCTACACGACGAACATCTA 105597 ||| || || ||||| |||||||||| Sbjct 7854 CTTCGAGCCATACACCTCGAACATCTA 7880 >seq2510 Length=23295 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || | || || || | ||||| || || |||||| | | | Sbjct 9441 CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGG 9500 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | ||||||| |||| || | || || || ||||| Sbjct 9501 TGGATCCAAGACAAGGATTCCA-CCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGA 9559 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||||| || || ||| | |||||| |||||||||||||| |||||||| Sbjct 9560 GGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCAT 9619 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 | | || ||| |||||||||||||| ||||| || || ||||| |||||| Sbjct 9620 GGCTGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCAC 9671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583236456152360