Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 280 2e-70
seq2510 127 2e-24
>seq1479
Length=10203
Score = 280 bits (310), Expect = 2e-70
Identities = 958/1467 (65%), Gaps = 47/1467 (3%)
Strand=Plus/Plus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214
|| ||||| |||| ||||||||| || |||| || || ||||| | ||| |
Sbjct 6436 TACTTTGGCTTCAAGACCCTTGAGCGTTCATACCTTCTCCGCCTTGATGGCAACGTTGCT 6495
Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274
| ||| |||||| ||||| | ||||| ||||| | || ||||| || || || |||||
Sbjct 6496 G-AAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGAGGATATTGA 6554
Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCA 104332
| | | ||||||||| || ||||| |||| || |||| ||||| | |||
Sbjct 6555 GAAGGCCATTGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCCTCCCCA 6612
Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392
|| ||||||||||||||||||||| |||| |||| |||||| | ||| ||
Sbjct 6613 ACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATG 6672
Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452
|||||||| || | |||||||||| || || | | ||||| |||||||||
Sbjct 6673 AAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAG 6732
Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512
|| || ||||| || || |||||||| | | | |||| | |||
Sbjct 6733 ACTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACCGGTGCATACATTGCC 6792
Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572
|| || || || | || | ||||| |||| ||||| ||||| || ||| ||| ||
Sbjct 6793 GGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCC 6852
Query 104573 CGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCC 104628
| || || | || | | ||| | | | || | |||| ||||| |||||||
Sbjct 6853 AGATACGTTGACCAGGGT-GGCAACAAGCGCCCTGGTGCCTTCGCCATCTATGTTGAGCC 6911
Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688
||||||||| ||| || | |||||| | || ||| | ||||| || | ||||| |
Sbjct 6912 ATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGT 6971
Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748
|| ||| || | |||| |||||||||||| || ||||||||||||||| | |||||
Sbjct 6972 CCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGA 7031
Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCG 104807
| ||| || | ||| ||||| | || || || || || ||||| | | || |
Sbjct 7032 GAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGACGTTT 7090
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG-----GAAGAA-GGTCGGGCGA 104861
||||| ||||| || || || ||| || |||||| |||||| ||||| ||
Sbjct 7091 ACGGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCGCAAGA 7150
Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921
| | || |||| || | ||| | | |||||| ||||||| || ||||| |
Sbjct 7151 CCATCAAGG-CCCAGAAGC-----TTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAG 7204
Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981
| | || | |||| | ||||| || || || |||| ||||| || || ||||| | |
Sbjct 7205 GAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCG 7264
Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041
|| ||| || || || || || || || || | || | | | |||||||
Sbjct 7265 GTACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAGG 7324
Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG- 105100
|| ||||||||| | ||||| | || || || | ||| || || || | ||| |
Sbjct 7325 TTGCCGTGTGTAACTTGGCATCCCTTGCCCTTCCAACGTACGTTGA--CATGGCCAACGG 7382
Query 105101 -ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAG 105159
|||| || | | || || ||||| || || | ||| || ||||| ||||
Sbjct 7383 CACATACGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACCTGAACAA 7442
Query 105160 AGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCG 105219
|||||||| || | |||||||| ||| || | || | | ||| |
Sbjct 7443 GATTATTGATGTCAACTACTACCCCGTCGAGGAGGCCAGGCGCAGCAACTTCCGTCACAG 7502
Query 105220 TCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG----TCGCCACG 105275
||| ||| | ||||||| |||||||| || |||| ||||||| | ||||
Sbjct 7503 ACCAGTTGCTGTCGGTGTCCAGGGTCTTGCTGATG----CATTCTTGGCCCTCCGCCTGC 7558
Query 105276 CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335
| || |||||| ||| || ||| | |||| | | || ||||||||||| || ||||
Sbjct 7559 CCTTCGATTCCCCCGAGGCTAAGCACCTCAACTCCCAGATCTTTGAGACCATCTACCACG 7618
Query 105336 CCGCTCTTGA-GGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 105392
||| |||| || ||| |||||||| || | | || | || || |||| |
Sbjct 7619 GTGCT-TTGACTGCATCCGTT--GAGTTGGCCCAGATCCACGGCACGTACGAGACCTACG 7675
Query 105393 AGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG 105451
|||| ||||||| || |||||| | ||| || | || ||||||| || | || |
Sbjct 7676 AGGGATCTCCAGTGTC-CAAGGGCGAGCTCCAGTACGACATGTGGG-GCGTCACTCCTAC 7733
Query 105452 C-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510
| | | |||||||| | ||||||| | |||||| || | ||| | || |||
Sbjct 7734 CGACCTGTGGGACTGGGACTCCCTCAAGGTCCAGATCAAGCAGCACGGTGTCCGCAACTC 7793
Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570
|| ||| | || || ||||| || || || ||| | || || | || || || ||
Sbjct 7794 CCTTCTCGTTGCGCCCATGCCCACTGCTTCGACCTCCCAGATTCTCGGCTTCAACGAGTG 7853
Query 105571 CTTTGAACCCTACACGACGAACATCTA 105597
||| || || ||||| ||||||||||
Sbjct 7854 CTTCGAGCCATACACCTCGAACATCTA 7880
>seq2510
Length=23295
Score = 127 bits (140), Expect = 2e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
||||| | |||||| | || | || || || | ||||| || || |||||| | | |
Sbjct 9441 CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGG 9500
Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832
||| | | |||| | | ||||||| |||| || | || || || |||||
Sbjct 9501 TGGATCCAAGACAAGGATTCCA-CCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGA 9559
Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
||||||||||||||| || || ||| | |||||| |||||||||||||| ||||||||
Sbjct 9560 GGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCAT 9619
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
| | || ||| |||||||||||||| ||||| || || ||||| ||||||
Sbjct 9620 GGCTGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCAC 9671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583236456152360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |