Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1479 302 5e-77 seq1537 179 4e-40 seq1071 165 9e-36 seq1847 140 4e-28 >seq1479 Length=10203 Score = 302 bits (334), Expect = 5e-77 Identities = 811/1228 (66%), Gaps = 23/1228 (2%) Strand=Plus/Minus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||||||||||| ||| | ||||| ||| | ||||| ||| || | ||||||||| Sbjct 7721 CCCCACATGTCGTACTGGAGCTCGCCCTTGGACACTGGAGATCCCTCGTAGGTCTCGTAC 7662 Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCA-TAAGGGCCGCGTGATAAATGCACTC 80657 | ||| | ||| ||||| |||| ||| | || | | || |||| || ||| ||| Sbjct 7661 GTGCCGTGGATCTGGGCCAACTCA-ACGGATGCAGTCAAAGCACCGTGGTAGATGGTCTC 7603 Query 80658 AAAGACGCCCTTGTTCACACCGCGC---GCCTGTGGGTCGTCGAACGACAAGCCCATCAT 80714 ||||| ||| | | || |||| ||| ||||| | || || | Sbjct 7602 AAAGATCTGGGAGTTGAG---GTGCTTAGCCTCGGGGGAATCGAAGGGCAGGCGGAGGGC 7546 Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774 || ||| | ||||| || ||||| || |||| || | || | ||| || ||| Sbjct 7545 CAAGAATGCATCAGCAAGACCCTGGACACCGACAGCAACTGGTCTGTGACGGAAGTTGCT 7486 Query 80775 TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT 80834 ||| ||||||| | ||||| |||| ||| || | ||||||||| Sbjct 7485 GCGCCTGGCCTCCTCGACGGGGTAGTAGTTGACATCAATAATCTTGTTCAGGTTCTTAAC 7426 Query 80835 AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT-TG--GTTCCCCTTCACAA- 80890 ||||||| |||| || || ||||| ||||| |||||| || || ||| || | ||| Sbjct 7425 AACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAAC 7366 Query 80891 --ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAA 80948 | | |||||| ||||| |||| || |||||||| ||||| || | | | | | Sbjct 7365 GTACGTTGGAAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTA 7306 Query 80949 CTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGA 81008 |||||| || |||||||||| ||||| || ||||| ||||| |||||||| Sbjct 7305 CTCGACAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCT 7246 Query 81009 CTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTT 81068 |||| ||||||||| |||||||| ||||| | ||| | || ||||| ||| |||| Sbjct 7245 CTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTC 7186 Query 81069 GAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCAC 81128 ||| |||| || ||||| || | ||||||| |||||| || || | | | Sbjct 7185 GAGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTCTTCTCCGACTC 7126 Query 81129 ATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTC 81188 || || |||| | ||||||| |||||| || || | | | ||||| || Sbjct 7125 GTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTC 7066 Query 81189 GTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGG 81248 ||| |||||||| || |||||| || ||||| ||| ||||||||| || || Sbjct 7065 GTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGG 7006 Query 81249 GATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308 ||||||||| ||| ||||| ||| ||| || | ||||| | || ||||| | Sbjct 7005 GATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCT 6946 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 ||| || | || || | || || || ||||||||||| | ||| | ||||| | || Sbjct 6945 CAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACC 6886 Query 81369 CTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACAT 81425 ||| ||||||||||| ||||| | |||||| ||| || || || | ||| Sbjct 6885 AGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCAT 6826 Query 81426 AGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--C 81483 || | |||||| | || | ||||| ||||| | || | || |||| || Sbjct 6825 GGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGAT 6766 Query 81484 ACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTC 81543 || || ||| | ||||| || || | |||||| ||| ||||| || Sbjct 6765 ACGATG--GATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTG 6708 Query 81544 ATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGAC 81603 | || ||||| || ||||| || ||||| | |||||||| | |||||| ||| |||| Sbjct 6707 AGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGAC 6648 Query 81604 ATCTGAGGGCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACG 81662 | ||| || || | || || |||||||| |||||||||| ||||| |||| || Sbjct 6647 AGCTG-GGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTT 6589 Query 81663 GTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGAT 81722 | ||||| |||| || || || || | |||||| || |||||||| || | Sbjct 6588 GGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAAC 6529 Query 81723 AGCTACACGCATAAACATGTACTGGGGC 81750 || |||||||||| ||||| ||| ||| Sbjct 6528 CGCCACACGCATAATCATGTGCTGTGGC 6501 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || ||||||||||| ||||||||||| ||||||||| | |||||| || Sbjct 8228 GTACGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAG 8169 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | ||| |||| || |||| |||||| || ||||| |||||| |||| Sbjct 8168 GTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG 8109 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || ||||| || || ||||| Sbjct 8108 AAGGCACCACGGTCAGCGGCCAT 8086 >seq1537 Length=49637 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || ||||||||||| || |||||||| ||||| Sbjct 26615 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 26556 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||||||||| || |||||| Sbjct 26555 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 26496 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||||| || ||||| | ||||| || Sbjct 26495 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 26436 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||||||||| | |||||| | ||||| || || Sbjct 26435 ATCCAGAAGGAGTCCACTCTTCACTTGGTCTTGAGACTTCGTGGAGG 26389 >seq1071 Length=16463 Score = 165 bits (182), Expect = 9e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || |||||||| || ||| | ||||||||||| | Sbjct 1748 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCT 1689 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| | || ||||||||||||||||| |||||||| |||||| Sbjct 1688 GACACTATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 1629 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| | ||||| || || ||||| | ||||||| ||| || || ||| ||||| || Sbjct 1628 CAGCGCTTGATTTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGC-GACTACAA 1570 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| || | ||| | |||||||| ||||| Sbjct 1569 CATTCAGAAGGAGTCGACTCTCCACTTGGTCCTTCGTCTTCGTGGTGG 1522 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| ||||| || ||||| || || |||||||| || ||| Sbjct 1520 ATGCAGATTTTCGTCAAGACTCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1461 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || ||||| | || || ||||| |||||||| || || || |||||| Sbjct 1460 GATACCATTGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAG 1401 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||||||||| || ||||||| || ||| | | || || || Sbjct 1400 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAAC 1341 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| || | || ||||||| || ||||| Sbjct 1340 ATTCAGAAGGAGTCTACTCTGCACTTGGTTCTGCGTCTGCGTGGTGG 1294 Score = 154 bits (170), Expect = 2e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | || || ||||| |||||||| ||||||||||| Sbjct 1064 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCA 1005 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || |||||||| |||||||| || || || |||||| Sbjct 1004 GACACCATTGACAACGTTAAGTCAAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 945 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| |||||||||| | || || ||| ||||| || Sbjct 944 CAGCGCCTGATCTTCGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGC-GACTACAA 886 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| ||||||||| | || | |||||||| ||||| ||| Sbjct 885 CATCCAGAAGGAGAGCACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGCCAA 834 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| ||||| || || || ||||| Sbjct 1292 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 1233 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| | || ||||| || |||||||| || || || |||||| Sbjct 1232 GATACCATCGATAACGTCAAGTCCAAGATTCAAGATAAGGAGGGCATCCCACCGGACCAG 1173 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| |||||||||| ||||| | | || || || Sbjct 1172 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACTTTGTCTGATTACAAC 1113 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| | ||||| || | || || || ||||| Sbjct 1112 ATCCAGAAGGAGTCCACATTACATCTTGTTCTCCGCCTCCGTGGTGG 1066 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||| ||||| |||| || | ||| | ||| Sbjct 1952 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATCGACAATGTTAAGAGC 1893 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || ||||||||||||||||| || |||||||| ||||| || || || || ||| Sbjct 1892 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 1833 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||| | || ||||| | ||||| || |||| ||||| ||||| || || Sbjct 1832 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 1773 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | ||||| || ||||| Sbjct 1772 TTGGTCCTCCGTCTGCGTGGTGG 1750 >seq1847 Length=30800 Score = 140 bits (154), Expect = 4e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| | || |||||||| || || |||||||| ||||| |||| || Sbjct 17596 CTTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTAT 17655 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || ||||||||||||||||||||||| ||||||||||| || Sbjct 17656 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCT 17715 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| ||||| || ||||||| || || || | ||||| || |||| || Sbjct 17716 GATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 17775 Query 27594 GG 27595 || Sbjct 17776 GG 17777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570286596669680