Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 118 9e-22
>seq1071
Length=16463
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || || ||| | || || ||||| |||||| | |||
Sbjct 1520 ATGCAGATTTTCGTCAAGACTCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1461
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || || || || || || || || ||||| || ||
Sbjct 1460 GATACCATTGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAG 1401
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || || || || |||| || | ||| | ||||||||||||
Sbjct 1400 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAAC 1341
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | || |||||| ||||| |||| ||||| ||
Sbjct 1340 ATTCAGAAGGAGTCTACTCTGCACTTGGTTCTGCGTCTGCGTGGTGGTAT 1291
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||| |||||| | || ||| | || || || ||||
Sbjct 1748 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCT 1689
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || ||||| ||||| || ||||| || || || ||
Sbjct 1688 GACACTATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 1629
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||| ||||| || ||||| || || || | ||| ||||||
Sbjct 1628 CAGCGCTTGATTTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTACAAC 1569
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||||||||| | || ||||| | ||| | || ||||| ||
Sbjct 1568 ATTCAGAAGGAGTCGACTCTCCACTTGGTCCTTCGTCTTCGTGGTGGTAT 1519
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||||| ||||| ||| | ||||| || ||||| || ||||
Sbjct 1292 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 1233
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | ||||| || |||||||| || || ||||| ||||| || ||
Sbjct 1232 GATACCATCGATAACGTCAAGTCCAAGATTCAAGATAAGGAGGGCATCCCACCGGACCAG 1173
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| ||||| || | || || | || | || |||||||||
Sbjct 1172 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACTTTGTCTGATTACAAC 1113
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || |||||| | ||| | || | || ||||| ||
Sbjct 1112 ATCCAGAAGGAGTCCACATTACATCTTGTTCTCCGCCTCCGTGGTGGTAT 1063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434900247593280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |